Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq73 241 2e-58 >seq73 Length=89549 Score = 241 bits (266), Expect = 2e-58 Identities = 1315/2073 (63%), Gaps = 41/2073 (2%) Strand=Plus/Minus Query 78706 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 78765 |||| ||| | ||||||||||| || || | || | | ||||| || ||||||||| Sbjct 18632 TCCTGGTCGACGGTGAATTGAATAGGGGCTGTAGCAGCCATAGTACGGAGGTAGTACATT 18573 Query 78766 CCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTC 78825 || || || || || | |||| || ||| ||||| || | ||| | | Sbjct 18572 CCAGTCTTCAGCCCCATCTTCCAGCCAGCGAAGTGCATGGATGTGATCTTGCCCATAGTG 18513 Query 78826 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 78885 || || | |||||| || | |||||| |||||| ||||| || || | ||| ||| Sbjct 18512 GGCTCCTTGAGATGGATGTTGAGAGATTGGGATTGATCAATGAAAGCACCACGGTCAGCA 18453 Query 78886 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 78945 ||||| | | || || ||| |||||||| | || || || | || || Sbjct 18452 GCCATCTGGAGGACGGTGCGTTGGCTGATTTCCCAGACCGTCTTGTATAGAGCTTTGATG 18393 Query 78946 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 79002 || | || | ||| | | ||||||||||| || || || || || || || ||||| Sbjct 18392 TCAGCAGGGATGTTGGGGATGTTCTGAATGGAGCCGCCTTCCGCAATGATTCTGTTCTTC 18333 Query 79003 ATCTCTTCATTCCATAATTTTCTCTCGGTTAA--AACTC--TAAGGAGATGCGGATTAAC 79058 || | || ||| | | ||| || || || | | ||| ||||| || Sbjct 18332 ATGTTGTCGGACCAGAGAC----CAAGGTCAACCAAATCCTTCAAGAGCCAGGGATTGAC 18277 Query 79059 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCAC 79118 ||||| ||||| |||| ||| || | || | ||| || || || ||||| || | Sbjct 18276 GACTTGGAATTCACCAGCCAACACACGACGGGAGTAGATGTTGGACGTGTATGGCTCGAA 18217 Query 79119 CGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAA 79178 |||| || || ||||| ||||||| || ||||| || |||||||| || || | | Sbjct 18216 GCATTCGTTGTTGCCCAAGATTTGAGAGGTGGATGCAGTAGGCATAGGGGCAACAAGGAG 18157 Query 79179 ACTATTTCTAAGACCGTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCCAAAGA 79236 | || | || ||| ||| | | || | | |||| | | ||||||||||| ||| Sbjct 18156 AGAGTTGCGAACACC--ATGTTTAGCAATCTCAGCTTTCAATGCATCCCAATCCCATAGA 18099 Query 79237 TCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGT-TACTAGCGTATGATCC 79295 || || || ||||||||| | |||||| || || ||||| | | | || || Sbjct 18098 TCTGAAGGAGTAACATTCCACATATCATACTGAAGGATACCTTGTGAGACCGGGCTGCCC 18039 Query 79296 TGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCC 79355 | || || ||||| || |||| | | ||| | ||| || ||| | ||| | Sbjct 18038 TCA-TAGGTCTCATAGGGACCTTGTTCCTTGGCGAGTTCGCATGACGCAGTCAGAGCTGC 17980 Query 79356 GTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGG 79415 | || |||||||||||||| | | ||||| | | || ||| | || || || Sbjct 17979 ATGGTAGATGGTTTCGAAAATTTGGATGTTGAGTTGACGGGCCTCTGGAGAGTCGAAAGG 17920 Query 79416 ATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATG 79475 | | || || || || ||||| | || |||||||||| ||| | ||||| || Sbjct 17919 AAGACGCAAAGCAAGGAAGGCATCTGCAAGACCCTGAACACCAAGACCAACAGGTCGGTG 17860 Query 79476 TCTCTTATTAGAAATTTCAG-CTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 79534 || || | || | | |||| || | ||| || || || ||||| || || || | Sbjct 17859 TCGGAAGTT-GCTCTTCCTGGCTTCGGGCACAGGGTAGTAGTTGATATCGATGATCTTGT 17801 Query 79535 TGAGATTCCTGACT-ATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAAT---CGT 79590 | | || | || | | |||| | || || | || | ||| ||| || | | Sbjct 17800 TCAAGTTTC-GAGTGACGACTTGGGTAACTTCATGAAGACGGCCAAAGTCATATTCACCT 17742 Query 79591 CCATCT--ATT-ACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCA 79647 | || || || || | | || | ||| || ||||| || || || | |||| Sbjct 17741 CGGGCTTGATCGACGAAGGTTGGAAGAGCCAGAGAGGCGAGATTGCAGACAGCGATCTCA 17682 Query 79648 TTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAA 79707 | | | || | | ||||| ||||| || || | | || || || | Sbjct 17681 TCTGGGGCACTGTACTCGACAATTTCCGTGCACAGATTGGAGCTCCGGATTGTCCCCAGG 17622 Query 79708 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTT 79767 || | || || ||||| ||||| || |||||||| ||||| || | ||||| || || Sbjct 17621 TTCTTCTGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATATAAGGAGTCCCGGTC 17562 Query 79768 TCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATA-GACTTGT 79825 || |||| | ||||| ||||| | ||| | | || | ||||| | | ||| Sbjct 17561 TCGGTCTGTGCTTCTAGGATCGCATACCACAACTTCTGG-GCCTTGACCGTCTGACG--- 17506 Query 79826 ATCTCTTTTCTCTTTCGTATTGTGTATATAATCGT--TCGAACTCGTCTCCCCAAACATC 79883 | ||| | ||||||| || ||| ||| | ||||| || || || | ||||| Sbjct 17505 ACCTCGTCCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCGCCATAGACATC 17446 Query 79884 GTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCG 79943 | | || || || | |||||| | || | ||| ||| | | || || || Sbjct 17445 AGCAAGGCCCGGTGCCTCATGAGGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACG 17386 Query 79944 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTC 80003 | |||| || ||||| ||| ||||||| || ||| | || | || | | ||| || Sbjct 17385 TCTCATGAATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTC 17326 Query 80004 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 80063 ||||| |||||| | || | || | | | | ||| | ||||| || |||| Sbjct 17325 CTTTCCGTGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAG 17266 Query 80064 GTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 80123 || ||||| | | || || || || || || ||||| || | || | || ||||| Sbjct 17265 ATAGATGGCAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCACATAACGGGCAGTGTT 17206 Query 80124 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATA 80183 || | || | | ||| ||||| | ||||||||| || || |||||||||| ||||| Sbjct 17205 GTTGAAGACACGAAGCATGGGAATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATA 17146 Query 80184 GCTTCCACTGGCACGAATATTACTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGA 80242 | ||| | |||||||| | | | | | || || || || || || | || |||| Sbjct 17145 GGAACCAGTAGCACGAATGCAA-TGAGCGTTGAGGCCAATACCGCCAGCAGTCTTGGAGA 17087 Query 80243 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAA 80302 | | || || || | || || || || ||||| ||||| || || |||||| | Sbjct 17086 TCATAGCACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGA 17027 Query 80303 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 80362 | || || |||| ||| | | ||| || ||||| || | || ||||| | Sbjct 17026 CCAAGAAGCATGAGGACAATTGAGGTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGG 16967 Query 80363 CGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCC 80422 |||| || || || || | |||| || ||||| ||||| || || || || || Sbjct 16966 CGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCAT 16907 Query 80423 ATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 80482 | ||| || || || || |||||||| | |||||| || ||||| || | | ||||| Sbjct 16906 CTCCATGGATGCCAACTGCCACACGCATGAGCATGTGTTGCGGTCTCTCGGCCA-CTTGT 16848 Query 80483 TATTTATT-TTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 80541 | | | || | || || ||| |||||||||| || || || || || | ||| Sbjct 16847 TTGCCAATCTTGAGCAGATATGATCTTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTG 16788 Query 80542 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCC 80601 |||||||| ||||||| || ||||||| || | ||| || | | |||| |||| | Sbjct 16787 AAGTCTCGGTCGTAAACGATGGCCGAGTTCAGCTCATCAGCATGTCTCATAAC-ACATTC 16729 Query 80602 ATGGTGATACTTGAA-ATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAA 80660 || | || | | || |||||||| || ||| || || || || | ||||| | | Sbjct 16728 ATACGTCTCCTGGGAGATCATCGGAGAGTGCTTCTTGTTCTTGGGGTTGATATAGTAGTA 16669 Query 80661 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGC 80720 | |||| || ||| | ||| |||| || || | |||||| ||||| || ||||| Sbjct 16668 GAGATCCGACACCACCGAAGAGAATTGTTTCTTAGTCTGCTTGTGGAGATTGGACACGGC 16609 Query 80721 TATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 || | || || | ||||||||||| ||||| Sbjct 16608 GATACGCGCTGCGAGGATGGCATAATCGGGATG 16576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718255556919000