Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq377 114 1e-20
seq883 107 2e-18
>seq377
Length=202478
Score = 114 bits (126), Expect = 1e-20
Identities = 252/368 (68%), Gaps = 11/368 (3%)
Strand=Plus/Plus
Query 50493 AGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCA 50552
|||| | ||||| ||| | ||||| || ||| | || ||||| || || || |||||
Sbjct 90930 AGGCCTTATGCCAGGCTTGACGTTCTCGAATGAGCTCATCTCGCGTGATGAGGGTATGCA 90989
Query 50553 CACAGACTTTGCGTGT-TTGTACTACAATACGCGCGTAAATGAAAAATTATCATACGAAA 50611
|| |||||||| ||| || | | ||| || | || | | || || | |||
Sbjct 90990 TACCGACTTTGCTTGTCTTCTGATGCAACACC----TCAA-GTATAAGCCCGATCCCAAA 91044
Query 50612 CA-ATTTTGGACATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCT 50670
| || |||||| ||| || || || | |||||| || || ||||| || || |||
Sbjct 91045 CTCATCGAGGACATCATCACCGAGGCTGTTGTCATCGAGAAGGAATTTTTGACAGATGCT 91104
Query 50671 TTACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTT 50730
|| || || || || | ||||||||||| | ||||| | || |||||||| |||
Sbjct 91105 TTGCCTGTCGCTCTGCTTGGCATGAACGCCAAACTGATGCAACAATATATTGAGTTCGTT 91164
Query 50731 GCAGACAG-ATTGTTGTTGCAGCTGGGACAACCGAAATACTATAATGCACGTAACCCCTT 50789
|| ||| | || | |||| || ||| | ||| ||||| ||||| | || ||||
Sbjct 91165 GCCGACCGTCTTCTCCTTGC-CCTCGGAAACAAGAAGTACTACAATGCCCAGAA-TCCTT 91222
Query 50790 TCCG-TTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAG 50848
|| | |||||| | ||||| || |||| ||| || |||||||| ||||| | ||||| |
Sbjct 91223 TCAGCTTTATGGACAACATCTCATTGGCGGGAAAGACAAACTTCTTCGAGAAGCGTGTCG 91282
Query 50849 GCGAATAC 50856
| || |||
Sbjct 91283 GTGATTAC 91290
>seq883
Length=160511
Score = 107 bits (118), Expect = 2e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041
|||| || ||||||||||| |||||||| || || | |||| ||||||||||||
Sbjct 37890 TGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCTTCGAGTTGC 37831
Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101
|| || ||| | || |||||||| || |||||||| || ||||| ||||| || ||
Sbjct 37830 TTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCCTGGATCTTG 37771
Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161
|| | | || | || || ||| || || |||| ||| | |||||||||||
Sbjct 37770 GACTTCACATTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTA 37711
Query 143162 AATGTTTTTACGAATATTTGCATA 143185
| || || ||||| |||||||||
Sbjct 37710 AGAGTCTTGACGAAGATTTGCATA 37687
Score = 95.1 bits (104), Expect = 1e-14
Identities = 135/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035
|| ||||| | ||||||||||| || ||||||||||| |||| |||| || |||
Sbjct 37668 ACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACTCAAGGTGCGGCCATCCTCG 37609
Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095
|| ||||| || || | || |||||||| ||||| ||||| |||||||| ||||| |
Sbjct 37608 AGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGA 37549
Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155
|| || |||| | || | || || ||| || || || | || | ||||||
Sbjct 37548 ATCTTGGACTTTACATTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTG 37489
Query 143156 CCGGTCAATG 143165
||||||| ||
Sbjct 37488 CCGGTCACTG 37479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507005051922000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |