Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq73 129 9e-25
>seq73
Length=89549
Score = 129 bits (142), Expect = 9e-25
Identities = 327/489 (67%), Gaps = 14/489 (3%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| |||||||| || || || || | ||| |||| |||| || |||||||||||
Sbjct 17227 CAGGGTGGCAATAAGCGTCCCGGTGCCTTTGCCATCTATCTGGAGCCATGGCACGCGGAT 17286
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| || || | | | || | || ||| || ||||||| || ||| | |||
Sbjct 17287 GTCTTCGATTGGCTGAACCTGAGAAAGAACCACGGAAAGGAAGAGGTTCGCGCCCGTGAC 17346
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC---AACGACGGTGGC 97052
|||||||||||||| ||| || ||| | ||||||| || ||| || || |
Sbjct 17347 TTGTTTTATGCACTTTGGACTCCGGATCTATTCATGAGACGTGTCGAGAAGAACCAAG-- 17404
Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112
|||||| || | || || | | |||| || || | ||| || ||||| ||
Sbjct 17405 -ACTGGACTCTGTTCTGTCCTCATGAGGCACCGGGCCTTGCTGATGTCTATGGCGAGGAA 17463
Query 97113 TTTGAGGCCAAGTAC--ACGGCCTACGAGCAAGAGGGCCGATA-CGTGAGACGAGTCGAT 97169
|| || ||| || || | || ||| ||||||| ||| ||| ||||| ||| |
Sbjct 17464 TTCGATGCCCTCTATGAACAG--TATGAGAAAGAGGGACGAGGTCGTCAGACG-GTCAAG 17520
Query 97170 GCACGAGAACT-GTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACAT 97228
|| | |||| | |||| | || ||| | || ||| ||||| || ||||| || ||
Sbjct 17521 GCCC-AGAAGTTGTGGTATGCGATCCTAGAAGCACAGACCGAGACCGGGACTCCTTATAT 17579
Query 97229 TCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGG 97288
|| ||||||||| || || || |||||||| || |||| || ||| | |
Sbjct 17580 GCTTTACAAGGATGCCTGCAACAAGAAGAGCAACCAGAAGAACCTGGGGACAATCCGGAG 17639
Query 97289 CTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGT 97348
|||||||||||||||||||||||| |||||| | || || |||| || || |||
Sbjct 17640 CTCCAATCTGTGCACGGAAATTGTCGAGTACAGTGCCCCAGATGAGATCGCTGTCTGCAA 17699
Query 97349 TCTGGCATC 97357
||| || ||
Sbjct 17700 TCTCGCCTC 17708
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741045536721000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |