Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq883 131 1e-25
>seq883
Length=160511
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194
||||||||| ||||| | || | ||| || || || || || || ||||| || ||||
Sbjct 38144 TGCCACCTCGCAATCGGAGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGC 38085
Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254
| ||| ||| |||||||||||||||| |||||| | ||||| ||||||||||| |
Sbjct 38084 TGAGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCG 38025
Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314
|||||||||| ||||| ||| || |||||| | || || || || ||| |
Sbjct 38024 GAATTCCTTCCTTGTCTTGAATCTTCGATTTTACATTGTCGATCGTGTCTGATGATTCCA 37965
Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
| || | || ||||| || || |||| || || ||||| |||||||||
Sbjct 37964 CTTCCAGTGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCATA 37915
Score = 120 bits (132), Expect = 2e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||| || || |||||||| |||||||| || || ||| | | ||||||| | |||
Sbjct 37890 TGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCTTCGAGTTGC 37831
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
||||| || | || | ||||||||||||| ||||| ||||| ||||| || |||
Sbjct 37830 TTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCCTGGATCTTG 37771
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
||| ||| | || ||||||||||| || || || | || ||||| || || ||
Sbjct 37770 GACTTCACATTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTA 37711
Query 15341 AGAGTTTTTACAAAAATTTGCATA 15364
||||| || || || |||||||||
Sbjct 37710 AGAGTCTTGACGAAGATTTGCATA 37687
Score = 95.1 bits (104), Expect = 9e-15
Identities = 133/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214
|| ||||| | ||| || ||||| || ||||||||||| || | | | | || ||
Sbjct 37668 ACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACTCAAGGTGCGGCCATCCTCG 37609
Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274
| |||||||| ||| | || | ||||||||| || ||||| ||||| ||||| |
Sbjct 37608 AGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGA 37549
Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334
|| ||| ||||||| | || ||||||||||| || || || | ||| ||||| ||
Sbjct 37548 ATCTTGGACTTTACATTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTG 37489
Query 15335 CCTGTCA 15341
|| ||||
Sbjct 37488 CCGGTCA 37482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362172689262975
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |