Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq883 116 3e-21
>seq883
Length=160511
Score = 116 bits (128), Expect = 3e-21
Identities = 158/218 (72%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 43906 TCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GTTTAATTGACGCT 43964
||| ||||||||||| || |||||||| || |||||||| || || | | || ||
Sbjct 38359 TCTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTG-CGTC 38301
Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024
|||| |||||||| || |||||||| ||||| || || || ||| | || | ||| ||||
Sbjct 38300 CATCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCTT 38241
Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084
|||| || ||| ||||| | ||| ||| || | | || || || | |||||
Sbjct 38240 TATCCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTAA 38181
Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122
| || || ||||| || ||||| ||||| || ||||||
Sbjct 38180 TAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCATG 38143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354771222318300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |