Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq883 116 3e-21 >seq883 Length=160511 Score = 116 bits (128), Expect = 3e-21 Identities = 158/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 43906 TCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GTTTAATTGACGCT 43964 ||| ||||||||||| || |||||||| || |||||||| || || | | || || Sbjct 38359 TCTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTG-CGTC 38301 Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024 |||| |||||||| || |||||||| ||||| || || || ||| | || | ||| |||| Sbjct 38300 CATCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCTT 38241 Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084 |||| || ||| ||||| | ||| ||| || | | || || || | ||||| Sbjct 38240 TATCCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTAA 38181 Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 | || || ||||| || ||||| ||||| || |||||| Sbjct 38180 TAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCATG 38143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354771222318300