Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq789 82.4 5e-11 >seq789 Length=50723 Score = 82.4 bits (90), Expect = 5e-11 Identities = 128/177 (72%), Gaps = 6/177 (3%) Strand=Plus/Minus Query 44371 CAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCGTCGTTC-A 44429 |||||| | |||||||| || | || |||| || ||||||||||||||| | | Sbjct 12592 CAAGGTACGCGTGAGGACCATCAAGGTTCCCCAGATTGGTGACAAGTTTGCGTCGCGCCA 12533 Query 44430 CGGCGCAAAAGGGGAC-ATGCGGAGCCGTCCTGAC-CCAGGAGGACATGCCCTTCGACAA 44487 ||| |||||||| || || | | | ||| | ||||||||| ||||| ||| || Sbjct 12532 TGGC-CAAAAGGGTACCATTGGTATCA--CCTACCGCCAGGAGGATATGCCTTTCACCAG 12476 Query 44488 AAACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGAC 44544 | | ||| | || || || ||||||||||| || |||||| ||||||| | ||||| Sbjct 12475 AGAGGGGATTGTCCCTGATCTCATCATCAATCCACACGCCATTCCCTCTCGCATGAC 12419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340131485495175