Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq883 100 3e-16
>seq883
Length=160511
Score = 100 bits (110), Expect = 3e-16
Identities = 151/211 (72%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||| ||| | ||| ||||| ||||| | ||| || || || | |||| | || ||
Sbjct 37896 ACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCTTCG 37837
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
|| || || ||| |||| || | | ||| || || |||||||||||||| ||||| |
Sbjct 37836 AGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCCTGG 37777
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGTTT 94976
|| || | ||| || | ||| || || || ||| ||||| |||| |||||||| |
Sbjct 37776 ATCTTGGACTTCACATTGTCGATGGTATC-GC-TGGACTCGACCTCAAGAGTGATGGTCT 37719
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || |||||||| || || ||||| |||||
Sbjct 37718 TGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37688
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851
|| ||||||||| |||| ||| ||||| || | || || || | ||||
Sbjct 38359 TCTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGTCC 38300
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
||| |||| || || || ||||||| |||| || ||||| || |||||||| |||||
Sbjct 38299 ATCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCTTT 38240
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
|| | || |||| ||||||| | | | |||||| | || || || | ||| ||
Sbjct 38239 ATCCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTAAT 38180
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| ||||| || | || || ||||||||||||||||
Sbjct 38179 AGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCATGC 38142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448282934631000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |