Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq883 100 3e-16 >seq883 Length=160511 Score = 100 bits (110), Expect = 3e-16 Identities = 151/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||| ||| | ||| ||||| ||||| | ||| || || || | |||| | || || Sbjct 37896 ACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCTTCG 37837 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || || || ||| |||| || | | ||| || || |||||||||||||| ||||| | Sbjct 37836 AGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCCTGG 37777 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGTTT 94976 || || | ||| || | ||| || || || ||| ||||| |||| |||||||| | Sbjct 37776 ATCTTGGACTTCACATTGTCGATGGTATC-GC-TGGACTCGACCTCAAGAGTGATGGTCT 37719 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || |||||||| || || ||||| ||||| Sbjct 37718 TGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37688 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 || ||||||||| |||| ||| ||||| || | || || || | |||| Sbjct 38359 TCTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGTCC 38300 Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| |||| || || || ||||||| |||| || ||||| || |||||||| ||||| Sbjct 38299 ATCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCTTT 38240 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | || |||| ||||||| | | | |||||| | || || || | ||| || Sbjct 38239 ATCCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTAAT 38180 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || ||||| || | || || |||||||||||||||| Sbjct 38179 AGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCATGC 38142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448282934631000