Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1281 176 7e-40
seq1241 147 3e-31
seq41 138 2e-28
>seq1281
Length=2074
Score = 176 bits (194), Expect = 7e-40
Identities = 202/269 (75%), Gaps = 2/269 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||||| | || || |||||||| || ||||||||||| ||||
Sbjct 1453 CGCCAAGCGTCACCGCAAGATCT-TACGTGACAACATCCAGGGTATCACCAAGCCCGCTA 1395
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||||||||| || || |||||||| ||||||||| |||| | || |||| || ||||
Sbjct 1394 TCCGTCGTCTCGCACGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 1335
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|||| |||| | |||| ||||||| || || |||| |||||| || || || |
Sbjct 1334 CCCGTGGTGTTCTTAAGACCTTCCTCGAGGGTGTCATCCGTGATGCCGTCACATACACTG 1275
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || | ||||| |||||||| | || | ||||| || | || || || |
Sbjct 1274 AGCACGCCAAGAGAAAGACCGTCACCTCGCTCGACGTTGTCTACGCCCTCAAGCGCCAGG 1215
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||||| | || ||||| || |||||
Sbjct 1214 GCCGTACCCTCTACGGTTTCGGTGGTTAA 1186
>seq1241
Length=131115
Score = 147 bits (162), Expect = 3e-31
Identities = 121/145 (83%), Gaps = 2/145 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATC-GCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
|||||||||||||| | |||||| | || || ||||||||||| ||||||||||| ||||
Sbjct 2386 CGCTAAGCGTCATCGGAAGATCT-TGCGCGACAACATCCAAGGTATCACCAAGCCCGCTA 2444
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
| || ||||| || ||||||||||| ||||||||| |||||| || ||||||| ||||
Sbjct 2445 TTCGACGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTATGAGGAGA 2504
Query 16551 TTCGTGATGTTTTGAAGATCTTCCT 16575
|||| ||| ||||||| ||||||
Sbjct 2505 CCCGTGGTGTCTTGAAGACCTTCCT 2529
>seq41
Length=92116
Score = 138 bits (152), Expect = 2e-28
Identities = 157/208 (75%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| ||||||||||| |||| |||||| || ||||| || || |||||||| || || |
Sbjct 5132 CGCCAAGCGTCATCGAAAGAT-TCTTCGCGACAACATTCAGGGTATCACCAAACCTGCCA 5190
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
| |||||||| |||||||||||||| ||||||||| |||| | || |||| ||||| |
Sbjct 5191 TTCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAAGAAA 5250
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
||| | || | || ||||||| | | || |||| ||||||| || ||| || |
Sbjct 5251 CTCGCGGCGTCCTCAAATCCTTCCTCGAATCTGTCATCCGTGATGCTGTCACCTACACTG 5310
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTC 16638
| ||||| || | ||||| ||||| ||
Sbjct 5311 AACACGCAAAGAGAAAGACCGTCACTTC 5338
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79073851397175
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |