Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq883 122 8e-23 seq73 86.0 6e-12 >seq883 Length=160511 Score = 122 bits (134), Expect = 8e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || || ||||| || | ||||| | ||| | |||||| Sbjct 37916 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATCACACTGGAAGTGGAATCATCA 37975 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || ||| |||||| ||||| ||||| || || || || ||| Sbjct 37976 GACACGATCGACAATGTAAAATCGAAGATTCAAGACAAGGAAGGAATTCCGCCGGACCAA 38035 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| || | || | || || |||||| | ||||| | | ||| |||||||||||||| Sbjct 38036 CAACGATTGATCTTCGCTGGAAAACAATTAGAAGACGGTCGAACTCTCAGCGACTATAAC 38095 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || || || || ||| ||||||| ||||| Sbjct 38096 ATCCAGAAGGAGTCGACTCTCCATCTCGTCCT 38127 Score = 120 bits (132), Expect = 3e-22 Identities = 132/176 (75%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 26805 ATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 26864 |||||| |||| | || || | ||| |||||||| | || || |||||| ||| Sbjct 37496 ATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAATGTAAAGTCCAAGATTCAGGAC 37555 Query 26865 AAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT 26924 || ||||| || ||||| ||||||||| | ||||||| || ||||||||| ||||| ||| Sbjct 37556 AAGGAAGGCATTCCTCCTGATCAACAACGTCTCATTTTCGCCGGCAAACAGCTCGAGGAT 37615 Query 26925 GATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 | | | | | || || || |||||||| ||||||||||| | ||| ||||||| Sbjct 37616 GGCCGCACCTTGAGTGATTACAACATTCAGAAAGAATCTACCTTGCATTTGGTCCT 37671 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || | || || || | ||||| | || | || || | | Sbjct 37688 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 37747 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || |||||||| | || || ||||| ||||| ||||| || |||||||| ||| Sbjct 37748 GATACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAA 37807 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||||| | |||||| ||||||||||| | | | |||| ||||| ||| Sbjct 37808 CAACGTCTCATTTTTGCCGGCAAGCAACTCGAAGACGGCCGCACTCTCAGTGACTACAAC 37867 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||||||||| ||| | || |||||||| Sbjct 37868 ATCCAAAAAGAATCGACTCTTCACCTGGTCCT 37899 >seq73 Length=89549 Score = 86.0 bits (94), Expect = 6e-12 Identities = 178/264 (67%), Gaps = 6/264 (2%) Strand=Plus/Minus Query 148620 TTCAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGCACAATCGTTGAGTGTTTTATAG 148679 || ||||| || ||||| | || || ||||| |||||| ||||| || | || Sbjct 17117 TTGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGCACAAGTCTTGAGAGTGTCGTAA 17058 Query 148680 ATGCCGTTAATACTGTCCTCTTGAATGTTAAGCAGGTAGCACGATGACATTTGAGGCATT 148739 || || | ||| |||||||||| |||| | || | |||| || |||| |||||| | Sbjct 17057 ATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGACAATTGAGG---T 17001 Query 148740 TTCA---TGCCAGACGAAAATAGAGTTGGACTAGCGTGAGTGAACAGCTTTGCCCGCATC 148796 | | |||| | || ||||||||| ||||| ||||| ||| ||| Sbjct 17000 TGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGTGAAGCACTTCTGGGACATG 16941 Query 148797 AATCTATAGGATTCGATAGCGCTTTCGATGTCATCACCATGAATCTGTAGAGCTACACGC 148856 | | |||| || || || | ||||||||||| ||||| || | || |||||| Sbjct 16940 AGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATGGATGCCAACTGCCACACGC 16881 Query 148857 ATCAGCATGTGTTGAGGCCTCTCG 148880 || ||||||||||| || |||||| Sbjct 16880 ATGAGCATGTGTTGCGGTCTCTCG 16857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478653574662000