Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq73 230 6e-55 >seq73 Length=89549 Score = 230 bits (254), Expect = 6e-55 Identities = 1038/1630 (64%), Gaps = 34/1630 (2%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| |||||| | ||||| ||| |||||| || |||| | || || |||| || Sbjct 16957 TTCACCCACGCCTCTCCAACTCTGTTCAATGCCGGCACTCCGCAACCTCAATTGTCCTCA 17016 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| | | | ||||| || || ||| ||||| || | ||||| || |||| | Sbjct 17017 TGCTTCTTGGTCGACATGAAAGAGGACAGCATTGAGGGAATTTACGACACTCTCAAGACT 17076 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATG--TTCGTG 363724 |||||| | || ||||||| ||| ||||| ||||| | | | | || || |||||| Sbjct 17077 TGTGCTATGATCTCCAAGACTGCTGGCGGTATTGGCCT--CAACGCTCATTGCATTCGTG 17134 Query 363725 C-ACAGAACAGTTAC---ATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATG 363780 | || | ||| | ||| ||| || || || ||||| || |||||||| Sbjct 17135 CTACTG----GTTCCTATATTGCCGGGACCAACGGCACTTCCAATGGTCTCATTCCCATG 17190 Query 363781 CTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGG 363840 |||||||| || |||| ||||| | || || ||||||||||| ||||| || Sbjct 17191 CTTCGTGTCTTCAACAACACTGCCCGTTATGTGGACCAGGGTGGCAATAAGCGTCCCGGT 17250 Query 363841 GCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGG 363900 || ||||| || ||||| ||||| || || ||| | || || | || | || | Sbjct 17251 GCCTTTGCCATCTATCTGGAGCCATGGCACGCGGATGTCTTCGATTGGCTGAACCTGAGA 17310 Query 363901 AAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCT 363960 || ||| ||||| || || | || || ||||| |||| |||||||||||| | | Sbjct 17311 AAGAACCACGGAAAGGAAGAGGTTCGCGCCCGTGACTTGTTTTATGCACTTTGGACTCCG 17370 Query 363961 GACCATTTTATGAAGCGCGTGGAG-GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGA 364019 || | || |||| || || ||| | ||| | ||| | || || || || || || Sbjct 17371 GATCTATTCATGAGACGTGTCGAGAAGAACCAAG-ACTGGACTCTGTTCTGTCCTCATGA 17429 Query 364020 ATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGA 364079 || || ||| | ||||| | || || || | | ||| || || ||| ||||||| Sbjct 17430 GGCACCGGGCCTTGCTGATGTCTATGGCGAGGAATTCGATGCCCTCTATGAACAGTATGA 17489 Query 364080 ATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGA 364139 |||||| | |||| |||| | || |||||| | |||| ||| ||| | || Sbjct 17490 GAAAGAGGGACGAGGTCGTCAGACGGTCAAGGCCCAGAAGTTGTGGTATGCGATCCTAGA 17549 Query 364140 TTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTC 364199 | |||| ||||| || || || |||||| | ||||| ||| | |||||| ||| Sbjct 17550 AGCACAGACCGAGACCGGGACTCCTTATATGCTTTACAAGGATGCCTGCAACAAGAAGAG 17609 Query 364200 CAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATA 364259 ||||||| || |||| || ||||| | | ||| || || || || ||| | || || Sbjct 17610 CAACCAGAAGAACCTGGGGACAATCCGGAGCTCCAATCTGTGCACGGAAATTGTCGAGTA 17669 Query 364260 CACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 || || || || |||| || || || || || || || | || ||||| | || || Sbjct 17670 CAGTGCCCCAGATGAGATCGCTGTCTGCAATCTCGCCTCTCTGGCTCTTCCAACCTTCGT 17729 Query 364320 ---AAAAG---ATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTAC 364373 ||| ||| | |||| | |||| |||| || ||| | | || Sbjct 17730 CGATCAAGCCCGAGGTGAATATGACTTTGGCCGTCTTCATGAAGTTACCCAAGTCGTCAC 17789 Query 364374 TTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTC 364433 | | || | ||||| | ||||| | || || || || | || |||||| | Sbjct 17790 TCGAAACTTGAACAAGATCATCGATATCAACTACTACCCTGTGCCCGAAGCCAGGAAGAG 17849 Query 364434 TAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGAT 364493 || | || || || || ||||||||||||| ||||| || || || | || | | Sbjct 17850 CAACTTCCGACACCGACCTGTTGGTCTTGGTGTTCAGGGTCTTGCAGATGCCTTCCT--T 17907 Query 364494 GC--TCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAA 364551 || | | | || || || || || || ||| || || | | || || ||| Sbjct 17908 GCTTTGCGTCTTCCTTTCGACTCTCCAGAGGCCCGTCAACTCAACATCCAAATTTTCGAA 17967 Query 364552 ACAATGTATTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGGAAAGTA 364610 || || || ||| || ||||||| || || | | | | ||| | ||| || || Sbjct 17968 ACCATCTACCATGCAGCTCTGACTGCGTCATGCGAACTCGCCAAGGAACAA-GGTCCCTA 18026 Query 364611 CTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGT 364670 || |||||||| ||| | || || || | | |||| |||| | |||||||| Sbjct 18027 TGAGACCTATGAGGGCAGCCCGGTCTCACAAGGTATCCTTCAGTATGATATGTGGAATGT 18086 Query 364671 CACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTAC 364730 || || || | | |||| | |||||| | | | | || || |||||| Sbjct 18087 TACTCCTTCAGATCTATGGGATTGGGATGCATTGAAAGCTGAGATTGCTAAACATGGTGT 18146 Query 364731 TCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAA 364790 ||||||||| ||| || || || ||||| || || || || | || ||| | || || Sbjct 18147 TCGCAACTCTCTCCTTGTTGCCCCTATGCCTACTGCATCCACCTCTCAAATCTTGGGCAA 18206 Query 364791 CAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGA 364850 |||||| |||||||| || | || ||| | || || || || || | | || || Sbjct 18207 CAACGAATGCTTCGAGCCATACACGTCCAACATCTACTCCCGTCGTGTGTTGGCTGGTGA 18266 Query 364851 ATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGA 364910 ||| | || || ||| | || | |||||| | |||| || || ||| || Sbjct 18267 ATTCCAAGTCGTCAATCCCTGGCTCTTGAAGGATTTGGTTGACCTTGGTCTCTGGTCCGA 18326 Query 364911 CAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCC 364970 || |||||||||| ||||| || | || || | |||||||| || | || Sbjct 18327 CAACATGAAGAACAGAATCATTGCGGAAGGCGGCTCCATTCAGAACATCCCCAACATCCC 18386 Query 364971 AGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGA 365030 | || | || || | ||||| || || |||||||| | || || || | | Sbjct 18387 TGCTGACATCAAAGCTCTATACAAGACGGTCTGGGAAATCAGCCAACGCACCGTCCTCCA 18446 Query 365031 TATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGAC 365090 ||||| || || || |||||||| || ||| ||| || | ||| || ||| | Sbjct 18447 GATGGCTGCTGACCGTGGTGCTTTCATTGATCAATCCCAATCTCTCAAC--ATCCAT--C 18502 Query 365091 TC----AGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTC 365146 || |||| || | |||| | ||||||||||| ||| || ||||| || | Sbjct 18503 TCAAGGAGCCCACTATGGGCAAGATCACATCCATGCACTTCGCTGGCTGGAAGATGGGGC 18562 Query 365147 TTAAGACAGG 365156 | ||||| || Sbjct 18563 TGAAGACTGG 18572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303328968653450