Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq73 125 7e-24
seq883 109 5e-19
seq1350 105 6e-18
seq256 91.5 1e-13
>seq73
Length=89549
Score = 125 bits (138), Expect = 7e-24
Identities = 947/1510 (63%), Gaps = 39/1510 (3%)
Strand=Plus/Minus
Query 145056 GATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGG 145115
|||||||||| || || || || |||||||||||||| | || | ||| |||||| | |
Sbjct 18283 GATTGACGACTTGGAATTCACCAGCCAACACACGACGGGAGTAGATGTTGGACGTGTATG 18224
Query 145116 GTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCA 145175
| || || | ||||| ||||||| |||||||| ||| | ||| || ||||| || |
Sbjct 18223 GCTCGAAGCATTCGTTGTTGCCCAAGATTTGAGAGGTGGATGCAGTAGGCATAGGGGCAA 18164
Query 145176 CCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCC 145235
| | | || ||||| | || || || || || | || | | | |||||||||
Sbjct 18163 CAAGGAGAGAGTTGCGAACACCATGTTTAGCAATCTCAGCTTTCAATGCATCCCAATCCC 18104
Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295
|||| | || | || | |||||| || ||||| | || || | | | ||||
Sbjct 18103 ATAGATCTGAAGGAGTAACATTCCACATATCATACTGAAGGATACCTTGTGAGACCGGGC 18044
Query 145296 TGCCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCCAG 145353
|||| | | ||| || | || ||| |||||||| ||||| ||| |||
Sbjct 18043 TGCCCTCATAGGTCTCATAG--GGACCTTGTTCCTTGGCGAGTTCGCATGACGCAGTCAG 17986
Query 145354 AGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTC 145413
||| | || || || ||| |||||| ||||||| | || || ||
Sbjct 17985 AGCTGCATGGTAGATGGTTTCGAAAATTTGGATGTTGAGTTGACGGGCCTCTGGAGAGTC 17926
Query 145414 GTACGGCATGCGCA--GCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATG 145471
| | || | |||| ||| | || ||||| || || ||||| | || | || |
Sbjct 17925 GAAAGGAAGACGCAAAGCA--AGGAAGGCATCTGCAAGACCCTGAACACCAAGACCAACA 17868
Query 145472 GGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCG---ATAGGATATCGATTACGGTCG 145528
|| || ||| | ||||||| |||| || ||| | ||| || || |||
Sbjct 17867 GGTCGGTGTCGGAAGTTGCTCTTCCTGGCT---TCGGGCACAGGGTAGTAGTTGATATCG 17811
Query 145529 ATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCA 145588
|| || || ||||||||||| || || | |||| | | | ||||||||
Sbjct 17810 ATGATCTTGTTCAAGTTTCGAGTGACGACTTGGGTAACTTCATGAAGACGGCCAAAGTCA 17751
Query 145589 AACCGAGCCTCG----TCAACGACCACACAGCTATTGACG-GCGATCGACGCCAAATTAC 145643
| | ||||| | | |||| | || | | || | || | || || | ||| |
Sbjct 17750 TATTCA-CCTCGGGCTTGATCGACGA---AGGT-TGGAAGAGCCAGAGAGGCGAGATTGC 17696
Query 145644 AAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATT 145703
| || || |||| || | | | ||||| | || || || | ||||| |||| |
Sbjct 17695 AGACAGCGATCTCATCTGGGGCACTGTACTCGACAATTTCCGTGCACAGATTGGAGCTCC 17636
Query 145704 TGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGT 145763
||| || ||||| || | ||| || || ||| ||||||| || |||||||| ||||| |
Sbjct 17635 GGATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATAT 17576
Query 145764 ACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCA 145823
| || || ||||| ||| | || | ||| | ||| | ||| || |
Sbjct 17575 AAGGAGTCCCGGTCTCGGTCTGTGCTTCTAGGATCGCATACCACAACTTCTGGGCCTTGA 17516
Query 145824 CCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAAC 145883
|| ||| | || ||||||| || || | ||||| | || || | |
Sbjct 17515 CCGTCTGACGACCTCGTCCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCGC 17456
Query 145884 CGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGG 145943
| ||| ||| | ||||| || || | ||||| | ||| | ||| | |||
Sbjct 17455 CATAGACATCAGCAAGGCCCGGTGCCTCATGAGGACAGAACAGAGTCCAGTCTTGGTTCT 17396
Query 145944 CGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTT 146003
| ||| || ||| || | ||| || ||| || || || | |||||| || ||
Sbjct 17395 TCTCGACACGTCTCATGAATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGGGC-- 17338
Query 146004 TGCAATCCTCAGCAC--CCATGTTTCGCT-TCAAATTAAGCACACTATAGATGTCCGCGT 146060
|| | |||| | || || ||| | ||| || ||| | ||| |||||||
Sbjct 17337 -GCGAACCTCTTCCTTTCCGTGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCGT 17279
Query 146061 GCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTT---GCCACCCTGGTCCACGT 146117
|||| || || | ||||| ||| | ||| || || || ||||||||||||||| |
Sbjct 17278 GCCATGGCTCCAGATAGATGGCAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCACAT 17219
Query 146118 GACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCG 146177
||| | ||||||| ||||| || | |||||| || || ||| |||||| |
Sbjct 17218 AACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAGACCATTGGAAGTGCCGTTGG 17159
Query 146178 TAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC-G 146236
| | || || || | || | ||||||| | || | ||| | |||||| |
Sbjct 17158 TCCCGGCAATATAGGAACCAGTAGCACGAATGCAATGAGCGTTGAGGCCAATACCGCCAG 17099
Query 146237 CCGTACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC 146295
| || |||||| || || || ||| ||| || ||||| || || |||||||| ||
Sbjct 17098 CAGT-CTTGGAGATCATAGCACAAGTCTT-GAGAGTGTCGTAAATTCCCTCAATGCTGTC 17041
Query 146296 GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAA 146355
| ||| ||| || ||||| ||| ||| || | ||| || || || |||
Sbjct 17040 CTCTTTCATGTCGACCAAGAAGCATGAGGACAATTGAGGTTGCGGAGTGCCGGCATTGAA 16981
Query 146356 CAACGTCGGGCTCGCGTGCGTAAA-CATTTTTCGGCTCATCATCCGATACGTTTCGATAG 146414
|| || || ||||| || || || || | || ||| | || || || || |
Sbjct 16980 CAGAGTTGGAGAGGCGTGGGTGAAGCACTTCTGGGA-CATGAGGTTGTAGGTCTCTATCG 16922
Query 146415 CGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCC 146474
| | | ||||| || ||||| ||||| | || || ||||||||||||||||| || |
Sbjct 16921 CCTTCTCGATGTCATCTCCATGGATGCCAACTGCCACACGCATGAGCATGTGTTGCGGTC 16862
Query 146475 GCTCCGCCACTTGATTGTCAATCTTTAACAAATAGCCGTTCTCCAGGGTTTTGTATCCGA 146534
||| |||||||| ||| ||||||| | || ||| | |||| || ||| | ||||
Sbjct 16861 TCTCGGCCACTTGTTTGCCAATCTTGAGCAGATATGATCTTTCCAAAGTCTTGAAGCCGA 16802
Query 146535 AAAATTTGTA 146544
| ||| |||
Sbjct 16801 AGTATTGGTA 16792
>seq883
Length=160511
Score = 109 bits (120), Expect = 5e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || ||||| | ||| || || || |||||||||||||| |||
Sbjct 37686 CCACCACGGAGGCGAAGGACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACTC 37627
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||| ||||| ||| | || | ||| || || || |||||
Sbjct 37626 AAGGTGCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGA 37567
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| || || ||| | | || | |||||| |||||||||
Sbjct 37566 ATGCCTTCCTTGTCCTGAATCTTGGACTTTACATTGTCGATGGTATCGCTGGACTCGACC 37507
Query 131188 TCGACGGTAACGGTTTTACCGGT 131210
|||| ||| | ||| || |||||
Sbjct 37506 TCGAGGGTGATGGTCTTGCCGGT 37484
Score = 91.5 bits (100), Expect = 1e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| ||||| || || || | ||| | ||||||||||| || ||||| || |||||
Sbjct 38143 GCCACCTCGCAATCGGAGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGCT 38084
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || || ||| |||| || || || ||| |||| || || || |||||||| ||
Sbjct 38083 GAGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCGG 38024
Query 131127 GATTCCTTCTTTGTC 131141
|||||||| |||||
Sbjct 38023 AATTCCTTCCTTGTC 38009
>seq1350
Length=234104
Score = 105 bits (116), Expect = 6e-18
Identities = 132/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
||||||| ||||||||||| |||| || || ||||| || |||||||| ||| |||
Sbjct 96582 CCTTTTGGATGTTGTAATCACTCAGTGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 96523
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| || ||||| |||||||| ||||| ||||| || || ||| || ||||| | |
Sbjct 96522 TCAAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTATCTTGGATCTTGGACTTGACGTTGT 96463
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | ||||||| ||||||| || | ||| | ||| || || || || || || ||||
Sbjct 96462 CGATTGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 96403
Query 131225 A 131225
|
Sbjct 96402 A 96402
>seq256
Length=205955
Score = 91.5 bits (100), Expect = 1e-13
Identities = 103/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || |||| ||||| || | || | || |||||||| ||||||||||| ||| |
Sbjct 110822 CCTCCCCGCAGGCGCAGGACCAGGTGCAACGTTGACTCCTTCTGAATGTTGTAGTCGGAC 110763
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| || || || |||||||| ||| |||| | || |||||||| ||||||
Sbjct 110762 AGAGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCAGGAGGG 110703
Query 131128 ATTCCTTCTTTGTCGGTG 131145
|| ||||| ||||| |||
Sbjct 110702 ATGCCTTCCTTGTCTGTG 110685
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472004097264000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |