Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq73 125 7e-24 seq883 109 5e-19 seq1350 105 6e-18 seq256 91.5 1e-13 >seq73 Length=89549 Score = 125 bits (138), Expect = 7e-24 Identities = 947/1510 (63%), Gaps = 39/1510 (3%) Strand=Plus/Minus Query 145056 GATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGG 145115 |||||||||| || || || || |||||||||||||| | || | ||| |||||| | | Sbjct 18283 GATTGACGACTTGGAATTCACCAGCCAACACACGACGGGAGTAGATGTTGGACGTGTATG 18224 Query 145116 GTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCA 145175 | || || | ||||| ||||||| |||||||| ||| | ||| || ||||| || | Sbjct 18223 GCTCGAAGCATTCGTTGTTGCCCAAGATTTGAGAGGTGGATGCAGTAGGCATAGGGGCAA 18164 Query 145176 CCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCC 145235 | | | || ||||| | || || || || || | || | | | ||||||||| Sbjct 18163 CAAGGAGAGAGTTGCGAACACCATGTTTAGCAATCTCAGCTTTCAATGCATCCCAATCCC 18104 Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295 |||| | || | || | |||||| || ||||| | || || | | | |||| Sbjct 18103 ATAGATCTGAAGGAGTAACATTCCACATATCATACTGAAGGATACCTTGTGAGACCGGGC 18044 Query 145296 TGCCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCCAG 145353 |||| | | ||| || | || ||| |||||||| ||||| ||| ||| Sbjct 18043 TGCCCTCATAGGTCTCATAG--GGACCTTGTTCCTTGGCGAGTTCGCATGACGCAGTCAG 17986 Query 145354 AGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTC 145413 ||| | || || || ||| |||||| ||||||| | || || || Sbjct 17985 AGCTGCATGGTAGATGGTTTCGAAAATTTGGATGTTGAGTTGACGGGCCTCTGGAGAGTC 17926 Query 145414 GTACGGCATGCGCA--GCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATG 145471 | | || | |||| ||| | || ||||| || || ||||| | || | || | Sbjct 17925 GAAAGGAAGACGCAAAGCA--AGGAAGGCATCTGCAAGACCCTGAACACCAAGACCAACA 17868 Query 145472 GGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCG---ATAGGATATCGATTACGGTCG 145528 || || ||| | ||||||| |||| || ||| | ||| || || ||| Sbjct 17867 GGTCGGTGTCGGAAGTTGCTCTTCCTGGCT---TCGGGCACAGGGTAGTAGTTGATATCG 17811 Query 145529 ATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCA 145588 || || || ||||||||||| || || | |||| | | | |||||||| Sbjct 17810 ATGATCTTGTTCAAGTTTCGAGTGACGACTTGGGTAACTTCATGAAGACGGCCAAAGTCA 17751 Query 145589 AACCGAGCCTCG----TCAACGACCACACAGCTATTGACG-GCGATCGACGCCAAATTAC 145643 | | ||||| | | |||| | || | | || | || | || || | ||| | Sbjct 17750 TATTCA-CCTCGGGCTTGATCGACGA---AGGT-TGGAAGAGCCAGAGAGGCGAGATTGC 17696 Query 145644 AAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATT 145703 | || || |||| || | | | ||||| | || || || | ||||| |||| | Sbjct 17695 AGACAGCGATCTCATCTGGGGCACTGTACTCGACAATTTCCGTGCACAGATTGGAGCTCC 17636 Query 145704 TGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGT 145763 ||| || ||||| || | ||| || || ||| ||||||| || |||||||| ||||| | Sbjct 17635 GGATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATAT 17576 Query 145764 ACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCA 145823 | || || ||||| ||| | || | ||| | ||| | ||| || | Sbjct 17575 AAGGAGTCCCGGTCTCGGTCTGTGCTTCTAGGATCGCATACCACAACTTCTGGGCCTTGA 17516 Query 145824 CCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAAC 145883 || ||| | || ||||||| || || | ||||| | || || | | Sbjct 17515 CCGTCTGACGACCTCGTCCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCGC 17456 Query 145884 CGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGG 145943 | ||| ||| | ||||| || || | ||||| | ||| | ||| | ||| Sbjct 17455 CATAGACATCAGCAAGGCCCGGTGCCTCATGAGGACAGAACAGAGTCCAGTCTTGGTTCT 17396 Query 145944 CGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTT 146003 | ||| || ||| || | ||| || ||| || || || | |||||| || || Sbjct 17395 TCTCGACACGTCTCATGAATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGGGC-- 17338 Query 146004 TGCAATCCTCAGCAC--CCATGTTTCGCT-TCAAATTAAGCACACTATAGATGTCCGCGT 146060 || | |||| | || || ||| | ||| || ||| | ||| ||||||| Sbjct 17337 -GCGAACCTCTTCCTTTCCGTGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCGT 17279 Query 146061 GCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTT---GCCACCCTGGTCCACGT 146117 |||| || || | ||||| ||| | ||| || || || ||||||||||||||| | Sbjct 17278 GCCATGGCTCCAGATAGATGGCAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCACAT 17219 Query 146118 GACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCG 146177 ||| | ||||||| ||||| || | |||||| || || ||| |||||| | Sbjct 17218 AACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAGACCATTGGAAGTGCCGTTGG 17159 Query 146178 TAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC-G 146236 | | || || || | || | ||||||| | || | ||| | |||||| | Sbjct 17158 TCCCGGCAATATAGGAACCAGTAGCACGAATGCAATGAGCGTTGAGGCCAATACCGCCAG 17099 Query 146237 CCGTACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC 146295 | || |||||| || || || ||| ||| || ||||| || || |||||||| || Sbjct 17098 CAGT-CTTGGAGATCATAGCACAAGTCTT-GAGAGTGTCGTAAATTCCCTCAATGCTGTC 17041 Query 146296 GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAA 146355 | ||| ||| || ||||| ||| ||| || | ||| || || || ||| Sbjct 17040 CTCTTTCATGTCGACCAAGAAGCATGAGGACAATTGAGGTTGCGGAGTGCCGGCATTGAA 16981 Query 146356 CAACGTCGGGCTCGCGTGCGTAAA-CATTTTTCGGCTCATCATCCGATACGTTTCGATAG 146414 || || || ||||| || || || || | || ||| | || || || || | Sbjct 16980 CAGAGTTGGAGAGGCGTGGGTGAAGCACTTCTGGGA-CATGAGGTTGTAGGTCTCTATCG 16922 Query 146415 CGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCC 146474 | | | ||||| || ||||| ||||| | || || ||||||||||||||||| || | Sbjct 16921 CCTTCTCGATGTCATCTCCATGGATGCCAACTGCCACACGCATGAGCATGTGTTGCGGTC 16862 Query 146475 GCTCCGCCACTTGATTGTCAATCTTTAACAAATAGCCGTTCTCCAGGGTTTTGTATCCGA 146534 ||| |||||||| ||| ||||||| | || ||| | |||| || ||| | |||| Sbjct 16861 TCTCGGCCACTTGTTTGCCAATCTTGAGCAGATATGATCTTTCCAAAGTCTTGAAGCCGA 16802 Query 146535 AAAATTTGTA 146544 | ||| ||| Sbjct 16801 AGTATTGGTA 16792 >seq883 Length=160511 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || ||||| | ||| || || || |||||||||||||| ||| Sbjct 37686 CCACCACGGAGGCGAAGGACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACTC 37627 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||| ||||| ||| | || | ||| || || || ||||| Sbjct 37626 AAGGTGCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGA 37567 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||| | | || | |||||| ||||||||| Sbjct 37566 ATGCCTTCCTTGTCCTGAATCTTGGACTTTACATTGTCGATGGTATCGCTGGACTCGACC 37507 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 |||| ||| | ||| || ||||| Sbjct 37506 TCGAGGGTGATGGTCTTGCCGGT 37484 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| ||||| || || || | ||| | ||||||||||| || ||||| || ||||| Sbjct 38143 GCCACCTCGCAATCGGAGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGCT 38084 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || ||| |||| || || || ||| |||| || || || |||||||| || Sbjct 38083 GAGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCGG 38024 Query 131127 GATTCCTTCTTTGTC 131141 |||||||| ||||| Sbjct 38023 AATTCCTTCCTTGTC 38009 >seq1350 Length=234104 Score = 105 bits (116), Expect = 6e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 ||||||| ||||||||||| |||| || || ||||| || |||||||| ||| ||| Sbjct 96582 CCTTTTGGATGTTGTAATCACTCAGTGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 96523 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | || ||||| |||||||| ||||| ||||| || || ||| || ||||| | | Sbjct 96522 TCAAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTATCTTGGATCTTGGACTTGACGTTGT 96463 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | ||||||| ||||||| || | ||| | ||| || || || || || || |||| Sbjct 96462 CGATTGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 96403 Query 131225 A 131225 | Sbjct 96402 A 96402 >seq256 Length=205955 Score = 91.5 bits (100), Expect = 1e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| ||||| || | || | || |||||||| ||||||||||| ||| | Sbjct 110822 CCTCCCCGCAGGCGCAGGACCAGGTGCAACGTTGACTCCTTCTGAATGTTGTAGTCGGAC 110763 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || || |||||||| ||| |||| | || |||||||| |||||| Sbjct 110762 AGAGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCAGGAGGG 110703 Query 131128 ATTCCTTCTTTGTCGGTG 131145 || ||||| ||||| ||| Sbjct 110702 ATGCCTTCCTTGTCTGTG 110685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472004097264000