Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq73 197 2e-45
>seq73
Length=89549
Score = 197 bits (218), Expect = 2e-45
Identities = 679/1046 (65%), Gaps = 12/1046 (1%)
Strand=Plus/Minus
Query 62846 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 62905
|| || ||||| ||||| || |||||||| ||||| || | ||||| || || || ||
Sbjct 17615 TGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATATAAGGAGTCCCGGTCTCGGTC 17556
Query 62906 TGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGATTTGTATCTCTT 62964
|| | ||||| ||||| | ||| | | || | ||||| | | | | ||| |
Sbjct 17555 TGTGCTTCTAGGATCGCATACCACAACTTCTGG-GCCTTGACCGTC--TGACGACCTCGT 17499
Query 62965 TTCTCTTTCGTATAGTGT--ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGT 63022
||||||| ||| ||| ||| | ||||| || || || | |||| | ||
Sbjct 17498 CCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCGCCATAGACATCAGCAAGG 17439
Query 63023 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63082
|| || |||| ||||| | || | ||| ||| || | || || ||| ||||
Sbjct 17438 CCCGGTGCCTCATGAGGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGTCTCATG 17379
Query 63083 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63142
|| ||||| ||| ||||||| || ||| | || | || | | || || |||||
Sbjct 17378 AATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCG 17319
Query 63143 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63202
|||||| | || | || | | | | ||| | ||||| || |||| || |||
Sbjct 17318 TGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAGATG 17259
Query 63203 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63262
|| | | || || || || || || ||||| || | || | || ||||| || |
Sbjct 17258 GCAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCACATAACGGGCAGTGTTGTTGAAG 17199
Query 63263 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCA 63322
|| | | ||| ||||| | ||||||||| || || |||||||| | |||||| |||
Sbjct 17198 ACACGAAGCATGGGAATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATAGGAACCA 17139
Query 63323 CTGGCACGAATATTACTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 63381
| |||||||| | | | | | || || || || || || | || ||||| | ||
Sbjct 17138 GTAGCACGAATGCAA-TGAGCGTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGC 17080
Query 63382 GCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 63441
|| || | || || || || ||||| || || || || |||||| | | ||
Sbjct 17079 ACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAA 17020
Query 63442 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGT 63501
|| |||| ||| | | ||| || ||||| || | || ||||| ||||| ||
Sbjct 17019 GCATGAGGACAATTGAGGTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGT 16960
Query 63502 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATG 63561
|| || || | || | || ||||| ||||| || || || || || | |||
Sbjct 16959 GAAGCACTTCTGGGACATGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATG 16900
Query 63562 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT-GTTTA 63620
|| || ||||| |||||||| | |||||| || ||||| || | | |||||| | |
Sbjct 16899 GATGCCAACTGCCACACGCATGAGCATGTGTTGCGGTCTCTCGGCCA-CTTGTTTGCCAA 16841
Query 63621 TTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 63680
| || | || || ||| |||||||||| || || || || || | ||| |||||||
Sbjct 16840 TCTTGAGCAGATATGATCTTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTC 16781
Query 63681 GTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAA 63740
| ||||||| || ||||||| || | ||| || | | |||| |||| |||
Sbjct 16780 GGTCGTAAACGATGGCCGAGTTCAGCTCATCAGCATGTCTCATAAC-ACATTCATACGTC 16722
Query 63741 TACTTGAA-ATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCC 63799
| || | | || || ||| | || ||| || || || |||| ||||| | | | ||||
Sbjct 16721 TCCTGGGAGATCATCGGAGAGTGCTTCTTGTTCTTGGGGTTGATATAGTAGTAGAGATCC 16662
Query 63800 TCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTA 63859
|| ||| | ||| |||| || || | ||||| ||||| || ||||| || |
Sbjct 16661 GACACCACCGAAGAGAATTGTTTCTTAGTCTGCTTGTGGAGATTGGACACGGCGATACGC 16602
Query 63860 GCGGCTAGAATGGCATAATCCGGATG 63885
|| || || ||||||||||| |||||
Sbjct 16601 GCTGCGAGGATGGCATAATCGGGATG 16576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633620317410000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |