Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq883 127 2e-24
>seq883
Length=160511
Score = 127 bits (140), Expect = 2e-24
Identities = 159/215 (74%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||| ||||| || || |||||||| | |||||||| || ||
Sbjct 37916 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATCACACTGGAAGTGGAATCATCA 37975
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| ||||| || || || | || | ||| ||||| ||||| ||||| || |||
Sbjct 37976 GACACGATCGA--CAATGTAAAATCGAAGATTCAA-GACAAGGAAGGAATTCCGCCGGAC 38032
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| || | || || || || |||||||||||||| | ||| ||| | |||| ||
Sbjct 38033 CAACAACGATTGATCTTCGCTGGAAAACAATTAGAAGACGGTCGAACTCTCAGCGACTAT 38092
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || || || || || || ||| | || ||
Sbjct 38093 AACATCCAGAAGGAGTCGACTCTCCATCTCGTCCT 38127
Score = 123 bits (136), Expect = 2e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| |||||||| || | || || | ||||| || || ||
Sbjct 38144 ATGCAGATCTTTGTCAAGACCTTGACCGGAAAGACTATTACGTTGGAAGTTGAATCTTCG 38203
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|||||||| || | ||| ||| ||| || ||||| || |||||||| || |||
Sbjct 38204 GACACTATTGACAACGTCAAGTCAAAGATCCAGGATAAAGAGGGTATTCCACCGGATCAA 38263
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || ||||| ||||| ||||| ||||||| |||||| | || ||||||
Sbjct 38264 CAGCGATTGATCTTTGCAGGCAAGCAATTGGAAGATGGACGCACTCTTTCTGACTACAAT 38323
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
||||| || || ||| || ||||| ||| | || ||
Sbjct 38324 ATTCAGAAGGAGAGCACTCTGCATTTGGTGTTGAGACT 38361
Score = 118 bits (130), Expect = 9e-22
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || |||||| | ||||| || ||||||| | || || |||||
Sbjct 37688 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 37747
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|| || ||||| ||||| || ||| ||||| ||||| ||||| || ||||||
Sbjct 37748 GATACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAA 37807
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| || | |||||||||||||| ||| | ||||| | |||||| | | || |||||
Sbjct 37808 CAACGTCTCATTTTTGCCGGCAAGCAACTCGAAGACGGCCGCACTCTCAGTGACTACAAC 37867
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
|| ||||||||||| || || ||
Sbjct 37868 ATCCAAAAAGAATCGACTCTTCA 37890
Score = 105 bits (116), Expect = 6e-18
Identities = 142/193 (74%), Gaps = 6/193 (3%)
Strand=Plus/Plus
Query 25021 TGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG--AA 25078
||||||| || ||||||| |||| || ||||| || || ||||| || || ||
Sbjct 37482 TGACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATCGA--CAATGTAAA 37539
Query 25079 G-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCG 25137
| | || | ||| ||||| ||||| ||||| ||||| ||||| || | ||||| ||||
Sbjct 37540 GTCCAAGATTCAG-GACAAGGAAGGCATTCCTCCTGATCAACAACGTCTCATTTTCGCCG 37598
Query 25138 GCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGC 25197
||||||| | || |||| ||||| || | |||||||| ||||| |||||||| ||
Sbjct 37599 GCAAACAGCTCGAGGATGGCCGCACCTTGAGTGATTACAACATTCAGAAAGAATCTACCT 37658
Query 25198 TACATTTAGTGCT 25210
| ||||| || ||
Sbjct 37659 TGCATTTGGTCCT 37671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433320210252125
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |