Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq883 163 5e-35
seq1350 138 2e-27
seq738 127 4e-24
seq256 111 3e-19
>seq883
Length=160511
Score = 163 bits (180), Expect = 5e-35
Identities = 158/203 (78%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318
|| || || ||||| || ||||||||||| ||| ||| || | || |||||||| ||
Sbjct 38118 TGGAGAGTCGACTCCTTCTGGATGTTATAGTCGCTGAGAGTTCGACCGTCTTCTAATTGT 38059
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| || ||||| || | || ||||||||| || ||||| ||||||||||||||||||||
Sbjct 38058 TTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCGGAATTCCTTCCTTGTCTTGAATCTTC 37999
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438
| || || ||||| ||||||| |||||| ||||||| |||||||| || || ||
Sbjct 37998 GATTTTACATTGTCGATCGTGTCTGATGATTCCACTTCCAGTGTGATGGTCTTGCCAGTC 37939
Query 68439 AGGGTCTTGACGAATATCTGCAT 68461
| ||||||||| || || |||||
Sbjct 37938 AAGGTCTTGACAAAGATTTGCAT 37916
Score = 147 bits (162), Expect = 4e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||| ||| || || || |||||||||||||| || || |
Sbjct 37914 CCACCACGGAGACGAAGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTG 37855
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || ||||| | ||||| ||||| || ||||| | |||||||||||| |||
Sbjct 37854 AGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGA 37795
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413
|| ||||||||||| || ||||| | ||| || |||||||| || |||| | || ||
Sbjct 37794 ATACCTTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTATC-GCTGGACTCGAC 37736
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || || || || ||||||||||| || |||||
Sbjct 37735 CTCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37688
Score = 118 bits (130), Expect = 2e-21
Identities = 150/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | ||||| || | || || ||||| || ||||| |||||
Sbjct 37686 CCACCACGGAGGCGAAGGACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACTC 37627
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | ||||| || | ||| || |||||||| ||||| | |||||| || || |||
Sbjct 37626 AAGGTGCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGA 37567
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
|||||||||||||| |||||||| | ||| || |||||||| || ||| || || ||
Sbjct 37566 ATGCCTTCCTTGTCCTGAATCTTGGACTTTACATTGTCGATGGTATC-GCTGGACTCGAC 37508
Query 68414 TTCCAAGGTGATGGTTTTTCCCGT 68437
|| | ||||||||| || || ||
Sbjct 37507 CTCGAGGGTGATGGTCTTGCCGGT 37484
>seq1350
Length=234104
Score = 138 bits (152), Expect = 2e-27
Identities = 138/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
||||||||||| ||||| ||||| | ||||| || | ||||| |||||||| ||
Sbjct 96580 TTTTGGATGTTGTAATCACTCAGTGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 96521
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
| | |||||||| || || ||||||||||| ||||| ||||| | ||||||| |||
Sbjct 96520 AAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTATCTTGGATCTTGGACTTGACGTTGTCG 96461
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | || || || || | ||||||||| || ||||||||||||||||||||
Sbjct 96460 ATTGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 96402
>seq738
Length=55810
Score = 127 bits (140), Expect = 4e-24
Identities = 329/499 (66%), Gaps = 2/499 (0%)
Strand=Plus/Plus
Query 176030 GCGCTTCACATTGTCTACGATATCCTTGGGGTTGTAAGCCGGAATGTTAGTGCTAAATCC 176089
|||||| | ||| || |||||||||| ||| |||||| || || || || | ||
Sbjct 19389 GCGCTTGAGATTCTCCACGATATCCTCGGGATTGTAATTGGGGATAGAAGAACTCCAGCC 19448
Query 176090 TGTTCCTATTCCTGACGATCCATTCACCAGGAGAAACGGGATGGTGGGAACATAGTATTC 176149
|||||| || || | ||||| ||||| | | || | | || ||||| | ||
Sbjct 19449 TGTTCCGATACCGTCGGCACCATTGACCAGAATCATGGGAACGACTGGCACATATAACTC 19508
Query 176150 CGGTTCAATCCGGTCGCCGTCATCCTCGAGGTAGTTCAGCAGACGCTCGTCGGCCTTGTG 176209
|||||| ||| | | ||||||| | ||| ||| ||| | || || |||| |||
Sbjct 19509 CGGTTCGATCTTCTTGTCGTCATCAGTGTTGTAAGTCAAGAGAGGTTCATCAGCCTGGTG 19568
Query 176210 GAAAATATCCCGGGTGTTGGGGGACAGTTGTGTGAAGATATACCTAGCAGACGCACTGTC 176269
||| | | ||||| | ||| ||||| | ||||| ||||| | ||| ||| |||
Sbjct 19569 GAAGAGCTTCCGGGCGAAGGGAGACAGACGGGTGAAAATATATCGAGCGCTAGCAGAGTC 19628
Query 176270 CTTGCCTCCGTGAAGGCGGGAACCGAATTGTCCGCGAGGAAGAAGCAAATTGATGTTATT 176329
| ||||| ||| || | ||||| || ||| || ||||| |||| || ||
Sbjct 19629 GCTACCTCCTTGATTTCGCGTGCCGAACTGGCCGGATGGCTCGAGCAAGTTGACATTGTT 19688
Query 176330 CGAACCCACGTAGTCTTGGGCCATTCCGACTATGGCGCCCTGGAGAGACGCCTCGCCGTG 176389
|| || || | | ||| |||| || || |||| |||||| ||||||||||||||
Sbjct 19689 GGATCCGACAAAATTTTGAGCCAGACCAACGATGGTCTGCTGGAGCGACGCCTCGCCGTG 19748
Query 176390 GTGAT-AGCCGGCGTTCTCACTTGTGTATCCGGCAAACTGCGCGACTTTGATTTCTTGTA 176448
|||| ||||| | ||| ||| ||||| | | |||||||| || ||||
Sbjct 19749 ATGATAAGCCGTCATTC-CACCGACAAGACCGGCGAGTTCGGCGACTTTCATATCTTTCT 19807
Query 176449 CGAGGTTGCGCTTCAACGCCGAGAACAGAATCTTCCGCTGCGAGGGCTTCAGACCATCGA 176508
| ||| || || || | ||||| || ||| ||||| ||||||| |||||||
Sbjct 19808 TCAAGTTTCGTTTGAAGCAAGCGAACATAACCTTTCGCTGACCAGGCTTCAACCCATCGA 19867
Query 176509 CGACCGACGGAATGGAACG 176527
| || || || || || ||
Sbjct 19868 CAACAGAGGGGATCGATCG 19886
>seq256
Length=205955
Score = 111 bits (122), Expect = 3e-19
Identities = 106/136 (78%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293
|||||| || ||||||| |||| ||| | ||| ||||| || || ||||| || |||||
Sbjct 110823 TCCTCCCCGCAGGCGCAGGACCAGGTGCAACGTTGACTCCTTCTGAATGTTGTAGTCGGA 110764
Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353
|| || | |||||||| | ||||| |||||||| || || | ||| ||||| || ||
Sbjct 110763 CAGAGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCAGGAGG 110704
Query 68354 AATGCCTTCCTTGTCT 68369
|||||||||||||||
Sbjct 110703 GATGCCTTCCTTGTCT 110688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921605407587000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |