Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq883 136 3e-27
seq256 86.0 5e-12
seq1350 84.2 2e-11
>seq883
Length=160511
Score = 136 bits (150), Expect = 3e-27
Identities = 155/208 (75%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || ||||| | ||||||||||| ||||||||||||||
Sbjct 37689 ATACCACCACGGAGGCGAAGGACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCA 37630
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|||| || || ||| || || ||||| || ||| | |||||||| ||||| || |||
Sbjct 37629 CTCAAGGTGCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGA 37570
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| ||||| |||||| |||| | || | ||| ||| |||| |||
Sbjct 37569 GGAATGCCTTCCTTGTCCTGAATCTTGGACTTTACATTGTCGATGGTATCGCTGGACTCG 37510
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCA 114360
|| || | ||| | || ||||||||||
Sbjct 37509 ACCTCGAGGGTGATGGTCTTGCCGGTCA 37482
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | || | || ||||||||||| |||||||| ||
Sbjct 37917 ATACCACCACGGAGACGAAGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCA 37858
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| | ||| || ||||| ||||| || || || | |||||||| |||||||| |||
Sbjct 37857 CTGAGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGA 37798
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| ||||| ||||| ||||| || | | || | ||| ||| |||| |||
Sbjct 37797 GGAATACCTTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTATCGCTGGACTCG 37738
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | || |||||||| ||||| || || || || |||||
Sbjct 37737 ACCTCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37688
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || || ||||| || ||||| | ||| ||| ||||| | |||||| |||
Sbjct 38112 GTCGACTCCTTCTGGATGTTATAGTCGCTGAGAGTTCGACCGTCTTCTAATTGTTTTCCA 38053
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| | || ||||||||||| ||||| ||||| ||||| |||||| ||||
Sbjct 38052 GCGAAGATCAATCGTTGTTGGTCCGGCGGAATTCCTTCCTTGTCTTGAATCTTCGATTTT 37993
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | ||||| | ||||| || |||| || | || ||||| |||| ||
Sbjct 37992 ACATTGTCGATCGTGTCTGATGATTCCACTTCCAGTGTGATGGTCTTGCCAGTCAAGGTC 37933
Query 114366 TTTACAAAAATCTGCAT 114382
|| ||||| || |||||
Sbjct 37932 TTGACAAAGATTTGCAT 37916
>seq256
Length=205955
Score = 86.0 bits (94), Expect = 5e-12
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244
||| || || || ||||||||||| ||| || ||| || |||||||||||| || ||
Sbjct 110793 CGTTGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCTTCAAGTTGCTTGCC 110734
Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTC 114289
||| |||| || || || ||||| ||||| |||||||| |||||
Sbjct 110733 GGCGAAGATCAGGCGTTGCTGGTCAGGAGGGATGCCTTCCTTGTC 110689
>seq1350
Length=234104
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254
||||| ||||||||||| |||| || || ||| |||||||| || || ||| ||||
Sbjct 96580 TTTTGGATGTTGTAATCACTCAGTGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 96521
Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314
| |||||||||||||| || |||||||| || || ||||| || | | ||
Sbjct 96520 AAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTATCTTGGATCTTGGACTTGACGTTGTCG 96461
Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 114373
| || |||| || ||||| || | ||| | || ||||| || || || || || ||
Sbjct 96460 ATTGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 96402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420126847427700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |