Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq883 136 3e-27 seq256 86.0 5e-12 seq1350 84.2 2e-11 >seq883 Length=160511 Score = 136 bits (150), Expect = 3e-27 Identities = 155/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || ||||| | ||||||||||| |||||||||||||| Sbjct 37689 ATACCACCACGGAGGCGAAGGACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCA 37630 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| || || ||| || || ||||| || ||| | |||||||| ||||| || ||| Sbjct 37629 CTCAAGGTGCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGA 37570 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| |||||| |||| | || | ||| ||| |||| ||| Sbjct 37569 GGAATGCCTTCCTTGTCCTGAATCTTGGACTTTACATTGTCGATGGTATCGCTGGACTCG 37510 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCA 114360 || || | ||| | || |||||||||| Sbjct 37509 ACCTCGAGGGTGATGGTCTTGCCGGTCA 37482 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | || | || ||||||||||| |||||||| || Sbjct 37917 ATACCACCACGGAGACGAAGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCA 37858 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | ||| || ||||| ||||| || || || | |||||||| |||||||| ||| Sbjct 37857 CTGAGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGA 37798 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| ||||| || | | || | ||| ||| |||| ||| Sbjct 37797 GGAATACCTTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTATCGCTGGACTCG 37738 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || |||||||| ||||| || || || || ||||| Sbjct 37737 ACCTCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37688 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || ||||| || ||||| | ||| ||| ||||| | |||||| ||| Sbjct 38112 GTCGACTCCTTCTGGATGTTATAGTCGCTGAGAGTTCGACCGTCTTCTAATTGTTTTCCA 38053 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| | || ||||||||||| ||||| ||||| ||||| |||||| |||| Sbjct 38052 GCGAAGATCAATCGTTGTTGGTCCGGCGGAATTCCTTCCTTGTCTTGAATCTTCGATTTT 37993 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||| | ||||| || |||| || | || ||||| |||| || Sbjct 37992 ACATTGTCGATCGTGTCTGATGATTCCACTTCCAGTGTGATGGTCTTGCCAGTCAAGGTC 37933 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| || ||||| Sbjct 37932 TTGACAAAGATTTGCAT 37916 >seq256 Length=205955 Score = 86.0 bits (94), Expect = 5e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 ||| || || || ||||||||||| ||| || ||| || |||||||||||| || || Sbjct 110793 CGTTGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCTTCAAGTTGCTTGCC 110734 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTC 114289 ||| |||| || || || ||||| ||||| |||||||| ||||| Sbjct 110733 GGCGAAGATCAGGCGTTGCTGGTCAGGAGGGATGCCTTCCTTGTC 110689 >seq1350 Length=234104 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254 ||||| ||||||||||| |||| || || ||| |||||||| || || ||| |||| Sbjct 96580 TTTTGGATGTTGTAATCACTCAGTGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 96521 Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314 | |||||||||||||| || |||||||| || || ||||| || | | || Sbjct 96520 AAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTATCTTGGATCTTGGACTTGACGTTGTCG 96461 Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 114373 | || |||| || ||||| || | ||| | || ||||| || || || || || || Sbjct 96460 ATTGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 96402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420126847427700