Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq73 176 9e-39 seq377 104 4e-17 >seq73 Length=89549 Score = 176 bits (194), Expect = 9e-39 Identities = 747/1152 (65%), Gaps = 40/1152 (3%) Strand=Plus/Minus Query 244300 CCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGG 244359 |||||| ||| |||| || | || | ||| ||||||||||| |||||| ||||| Sbjct 18081 CCACATATCATACTGAAGGATACCTTGTGAGACCGGGCTGCCCTCATAGGTCTCATAGGG 18022 Query 244360 ACCGTCGCGCTGGGCCAGCTTACAGCTCTC-GTCGAGGGCGGCGTAGTAGATGGTCTCGA 244418 ||| | || ||| || | || | | ||| || || || | ||||||||| |||| Sbjct 18021 ACCTTGTTCCTTGGCGAGTTCGCATGACGCAGTC-AGAGCTGCATGGTAGATGGTTTCGA 17963 Query 244419 AGATCATCTTGTTCATGTCGCGGGCCT-TGCCGCAGGTGAAGGG--GATGCCCATCATCA 244475 | || |||| | | ||||||| || | || ||| || || || | || | Sbjct 17962 AAATTTGGATGTTGAGTTGACGGGCCTCTGGAG-AGTCGAAAGGAAGACGCAAAGCA--A 17906 Query 244476 TGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGC 244535 |||| | || || || ||||| || || | || | |||| |||||| |||| Sbjct 17905 GGAAGGCATCTGCAAGACCCTGAACACCAAGACCAACAGGTCGGTGTCGGAAGTTGCTCT 17846 Query 244536 GCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGA 244595 | ||||||||||||| ||||| ||||| ||||| | |||||| | ||| || |||| Sbjct 17845 TCCTGGCTTCGGGCACAGGGTAGTAGTTGATATCGATGATCTTGTTCAAGTTTCGAGTGA 17786 Query 244596 TCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGG 244655 | || || || || | |||||| || || |||||| | | Sbjct 17785 CGACTTGGGTAACTTCATGAAGACGGCCAAAGTCATATTCA-------CCTCGG-GCT-- 17736 Query 244656 TGATCCTCACAAACTCGTTG--AGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTC 244713 ||||| || || |||| || || | ||| || |||||||| || | ||| || Sbjct 17735 TGATCG--ACGAAG--GTTGGAAGAGCCAGAGAGGCGAGATTGCAGACAGCGATCTCATC 17680 Query 244714 CGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTG 244773 | | |||||| |||||| || ||||| || || || | ||| || ||||||| Sbjct 17679 TGGGGCACTGTACTCGACAATTTCCGTGCACAGATTGGAGCTCCGGATTGTCCCCAGGTT 17620 Query 244774 CTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTC 244833 || || ||| ||| ||||||||| |||||||| ||||| | || ||||||||| Sbjct 17619 CTTCTGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATATAAGGAGTCCCGGTCTC 17560 Query 244834 GAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCT 244892 | ||| || | |||| ||| | ||| | | | |||||||||||| ||| ||| Sbjct 17559 GGTCTGTGCTTCTAGGATCGCA-TACCACAACTTCTGGGCCTTGACCGTCTGACGA-CCT 17502 Query 244893 TG-CCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCT 244951 | |||||| ||| || | || ||||| ||||| || ||| |||| || | Sbjct 17501 CGTCCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCGCCATAGACATCAGCA 17442 Query 244952 AGGCCGGG-GCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCC-TCT 245009 ||||| || || | | || || | ||| |||| || | | || ||| | ||| Sbjct 17441 AGGCCCGGTGCCTCATGA-GGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGTCT 17383 Query 245010 GCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCG 245069 |||||| || || || |||| || || | || | ||| | || | ||| ||| Sbjct 17382 -CATGAATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCT 17324 Query 245070 AGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGT 245129 || |||||| ||||| | || | || ||||| || ||||||| ||||||| | Sbjct 17323 TTCCGTGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGAT 17264 Query 245130 AGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-CG 245188 ||| || | ||| ||||| ||||| ||||| |||||||||| ||| || | | Sbjct 17263 AGATGGCAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCA-CATAACGGGCAGTGTTG 17205 Query 245189 TTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAG 245248 ||||||| || || | || | | || || || ||||||||| || || ||| Sbjct 17204 TTGAAGACACGAAGCATGGGAATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATAG 17145 Query 245249 GCGCCCTTGCCCCTGAGGTTGC--TGA-TGGACATGCCTAGTCCGCCGGCGTGCTTGGAG 245305 | || | | | | ||| ||| | | ||| | ||||| || ||||||| Sbjct 17144 GAACCAGTAGCAC---GAATGCAATGAGCGTTGAGGCCAATACCGCCAGCAGTCTTGGAG 17088 Query 245306 ATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTG 245365 || | || || |||||| ||||| || ||||| ||||||||| ||||||| | Sbjct 17087 ATCATAGCACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCG 17028 Query 245366 AGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTG 245425 | || ||||| ||||||| || || | || ||| | ||||||||||| || | Sbjct 17027 ACCAAGAAGCATGAGGACAATTGAGGTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAG 16968 Query 245426 GCGTGGGTAAAG 245437 |||||||| ||| Sbjct 16967 GCGTGGGTGAAG 16956 >seq377 Length=202478 Score = 104 bits (114), Expect = 4e-17 Identities = 371/583 (64%), Gaps = 64/583 (11%) Strand=Plus/Plus Query 42618 GCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAG 42677 ||||| || || || ||||||||| |||||||| |||||||| | || |||||| Sbjct 90720 GCCATTGATACTATCCCCTGCATCCGCAAGAAGGCTGACTGGGCCTTGAAGTGGATCTC- 90778 Query 42678 AGTCCCGACG-CAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTT 42736 || | | | | | |||| | | | || || || || | |||||||| ||||| || Sbjct 90779 AGACAAGGAGTCTAGCTTCGCCCAACGCCTCGTCGCATTCTCTGCCGTCGAAGGCATTTT 90838 Query 42737 CTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCA--AGCAGAAGG--TGT--------- 42783 |||||| ||| | |||||||||||||||||||| | |||| |||| ||| Sbjct 90839 CTTCTCCGGCTCATTCGCCTCCATCTTCTGGCTGAAGAGCA-AAGGCATGTAATGCTCCA 90897 Query 42784 -------------------------------------CGATGCCCGGACTCACCTTCTCG 42806 ||||| || | || |||||| Sbjct 90898 ATAATAGACATGTTCTTATGCTAATCTCTTACAGGCCTTATGCCAGGCTTGACGTTCTCG 90957 Query 42807 AACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCG 42866 || || |||||| | || ||||| |||||| |||||||| || || ||| | | Sbjct 90958 AATGAGCTCATCTCGCGTGATGAGGGTATGCATACCGACTTTGCTTGTCTTCTGAT---G 91014 Query 42867 AGCCACCTCAGGCACAAGCCC--TCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCG 42924 ||||||| | | |||||| || | | | || || ||||||||| ||||| | Sbjct 91015 CAACACCTCAAGTATAAGCCCGATCCCA--AACTCATCGAGGACATCATCACCGAGGCTG 91072 Query 42925 TGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACC 42984 | | ||||||||||| || | || | | |||| || | ||| | ||||||||| Sbjct 91073 TTGTCATCGAGAAGGAATTTTTGACAGATGCTTTGCCTGTCGCTCTGCTTGGCATGAACG 91132 Query 42985 ACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT--GTGCCAGATGGG 43042 | | || ||| | || || ||| ||| ||||||| ||| || |||| | || Sbjct 91133 CCAAACTGATGCAACAATATATTGAGTTCGTTGCCGACCGTCTTCTCCTTGCC--CTCGG 91190 Query 43043 TCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGA 43102 || |||||| | | | || ||| ||||||||| |||||||| |||| Sbjct 91191 AAACAAGAAGTACTACAATGCCCAGAATCCTTTCAGCTTTATGGACAACATCTCATTGGC 91250 Query 43103 GGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||| ||||| ||||| ||||||||||| |||| || |||||| Sbjct 91251 GGGAAAGACAAACTTCTTCGAGAAGCGTGTCGGTGATTACCAG 91293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944321788746000