Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq73 176 9e-39
seq377 104 4e-17
>seq73
Length=89549
Score = 176 bits (194), Expect = 9e-39
Identities = 747/1152 (65%), Gaps = 40/1152 (3%)
Strand=Plus/Minus
Query 244300 CCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGG 244359
|||||| ||| |||| || | || | ||| ||||||||||| |||||| |||||
Sbjct 18081 CCACATATCATACTGAAGGATACCTTGTGAGACCGGGCTGCCCTCATAGGTCTCATAGGG 18022
Query 244360 ACCGTCGCGCTGGGCCAGCTTACAGCTCTC-GTCGAGGGCGGCGTAGTAGATGGTCTCGA 244418
||| | || ||| || | || | | ||| || || || | ||||||||| ||||
Sbjct 18021 ACCTTGTTCCTTGGCGAGTTCGCATGACGCAGTC-AGAGCTGCATGGTAGATGGTTTCGA 17963
Query 244419 AGATCATCTTGTTCATGTCGCGGGCCT-TGCCGCAGGTGAAGGG--GATGCCCATCATCA 244475
| || |||| | | ||||||| || | || ||| || || || | || |
Sbjct 17962 AAATTTGGATGTTGAGTTGACGGGCCTCTGGAG-AGTCGAAAGGAAGACGCAAAGCA--A 17906
Query 244476 TGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGC 244535
|||| | || || || ||||| || || | || | |||| |||||| ||||
Sbjct 17905 GGAAGGCATCTGCAAGACCCTGAACACCAAGACCAACAGGTCGGTGTCGGAAGTTGCTCT 17846
Query 244536 GCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGA 244595
| ||||||||||||| ||||| ||||| ||||| | |||||| | ||| || ||||
Sbjct 17845 TCCTGGCTTCGGGCACAGGGTAGTAGTTGATATCGATGATCTTGTTCAAGTTTCGAGTGA 17786
Query 244596 TCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGG 244655
| || || || || | |||||| || || |||||| | |
Sbjct 17785 CGACTTGGGTAACTTCATGAAGACGGCCAAAGTCATATTCA-------CCTCGG-GCT-- 17736
Query 244656 TGATCCTCACAAACTCGTTG--AGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTC 244713
||||| || || |||| || || | ||| || |||||||| || | ||| ||
Sbjct 17735 TGATCG--ACGAAG--GTTGGAAGAGCCAGAGAGGCGAGATTGCAGACAGCGATCTCATC 17680
Query 244714 CGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTG 244773
| | |||||| |||||| || ||||| || || || | ||| || |||||||
Sbjct 17679 TGGGGCACTGTACTCGACAATTTCCGTGCACAGATTGGAGCTCCGGATTGTCCCCAGGTT 17620
Query 244774 CTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTC 244833
|| || ||| ||| ||||||||| |||||||| ||||| | || |||||||||
Sbjct 17619 CTTCTGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATATAAGGAGTCCCGGTCTC 17560
Query 244834 GAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCT 244892
| ||| || | |||| ||| | ||| | | | |||||||||||| ||| |||
Sbjct 17559 GGTCTGTGCTTCTAGGATCGCA-TACCACAACTTCTGGGCCTTGACCGTCTGACGA-CCT 17502
Query 244893 TG-CCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCT 244951
| |||||| ||| || | || ||||| ||||| || ||| |||| || |
Sbjct 17501 CGTCCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCGCCATAGACATCAGCA 17442
Query 244952 AGGCCGGG-GCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCC-TCT 245009
||||| || || | | || || | ||| |||| || | | || ||| | |||
Sbjct 17441 AGGCCCGGTGCCTCATGA-GGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGTCT 17383
Query 245010 GCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCG 245069
|||||| || || || |||| || || | || | ||| | || | ||| |||
Sbjct 17382 -CATGAATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCT 17324
Query 245070 AGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGT 245129
|| |||||| ||||| | || | || ||||| || ||||||| ||||||| |
Sbjct 17323 TTCCGTGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGAT 17264
Query 245130 AGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-CG 245188
||| || | ||| ||||| ||||| ||||| |||||||||| ||| || | |
Sbjct 17263 AGATGGCAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCA-CATAACGGGCAGTGTTG 17205
Query 245189 TTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAG 245248
||||||| || || | || | | || || || ||||||||| || || |||
Sbjct 17204 TTGAAGACACGAAGCATGGGAATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATAG 17145
Query 245249 GCGCCCTTGCCCCTGAGGTTGC--TGA-TGGACATGCCTAGTCCGCCGGCGTGCTTGGAG 245305
| || | | | | ||| ||| | | ||| | ||||| || |||||||
Sbjct 17144 GAACCAGTAGCAC---GAATGCAATGAGCGTTGAGGCCAATACCGCCAGCAGTCTTGGAG 17088
Query 245306 ATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTG 245365
|| | || || |||||| ||||| || ||||| ||||||||| ||||||| |
Sbjct 17087 ATCATAGCACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCG 17028
Query 245366 AGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTG 245425
| || ||||| ||||||| || || | || ||| | ||||||||||| || |
Sbjct 17027 ACCAAGAAGCATGAGGACAATTGAGGTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAG 16968
Query 245426 GCGTGGGTAAAG 245437
|||||||| |||
Sbjct 16967 GCGTGGGTGAAG 16956
>seq377
Length=202478
Score = 104 bits (114), Expect = 4e-17
Identities = 371/583 (64%), Gaps = 64/583 (11%)
Strand=Plus/Plus
Query 42618 GCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAG 42677
||||| || || || ||||||||| |||||||| |||||||| | || ||||||
Sbjct 90720 GCCATTGATACTATCCCCTGCATCCGCAAGAAGGCTGACTGGGCCTTGAAGTGGATCTC- 90778
Query 42678 AGTCCCGACG-CAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTT 42736
|| | | | | | |||| | | | || || || || | |||||||| ||||| ||
Sbjct 90779 AGACAAGGAGTCTAGCTTCGCCCAACGCCTCGTCGCATTCTCTGCCGTCGAAGGCATTTT 90838
Query 42737 CTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCA--AGCAGAAGG--TGT--------- 42783
|||||| ||| | |||||||||||||||||||| | |||| |||| |||
Sbjct 90839 CTTCTCCGGCTCATTCGCCTCCATCTTCTGGCTGAAGAGCA-AAGGCATGTAATGCTCCA 90897
Query 42784 -------------------------------------CGATGCCCGGACTCACCTTCTCG 42806
||||| || | || ||||||
Sbjct 90898 ATAATAGACATGTTCTTATGCTAATCTCTTACAGGCCTTATGCCAGGCTTGACGTTCTCG 90957
Query 42807 AACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCG 42866
|| || |||||| | || ||||| |||||| |||||||| || || ||| | |
Sbjct 90958 AATGAGCTCATCTCGCGTGATGAGGGTATGCATACCGACTTTGCTTGTCTTCTGAT---G 91014
Query 42867 AGCCACCTCAGGCACAAGCCC--TCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCG 42924
||||||| | | |||||| || | | | || || ||||||||| ||||| |
Sbjct 91015 CAACACCTCAAGTATAAGCCCGATCCCA--AACTCATCGAGGACATCATCACCGAGGCTG 91072
Query 42925 TGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACC 42984
| | ||||||||||| || | || | | |||| || | ||| | |||||||||
Sbjct 91073 TTGTCATCGAGAAGGAATTTTTGACAGATGCTTTGCCTGTCGCTCTGCTTGGCATGAACG 91132
Query 42985 ACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT--GTGCCAGATGGG 43042
| | || ||| | || || ||| ||| ||||||| ||| || |||| | ||
Sbjct 91133 CCAAACTGATGCAACAATATATTGAGTTCGTTGCCGACCGTCTTCTCCTTGCC--CTCGG 91190
Query 43043 TCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGA 43102
|| |||||| | | | || ||| ||||||||| |||||||| ||||
Sbjct 91191 AAACAAGAAGTACTACAATGCCCAGAATCCTTTCAGCTTTATGGACAACATCTCATTGGC 91250
Query 43103 GGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
||| ||||| ||||| ||||||||||| |||| || ||||||
Sbjct 91251 GGGAAAGACAAACTTCTTCGAGAAGCGTGTCGGTGATTACCAG 91293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944321788746000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |