Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq883 100 2e-16 seq256 82.4 6e-11 >seq883 Length=160511 Score = 100 bits (110), Expect = 2e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 33915 CAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCA-ATTGTCGCTCGT 33973 || ||||| ||| || ||||||||||||||||| ||||| || | | | || || | | Sbjct 38356 CAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTG-CGTCCAT 38298 Query 33974 CGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCTTTGT 34033 | |||||||||||||| ||||| |||| ||||| |||||| || | | |||||| | Sbjct 38297 CTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCTTTAT 38238 Query 34034 CCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGTTATTG 34093 || || ||| ||| | | | | | || | |||||| ||| | ||| || | Sbjct 38237 CCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTAATAG 38178 Query 34094 TTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 | |||||||| | || || |||||||| ||||| Sbjct 38177 TCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 38144 >seq256 Length=205955 Score = 82.4 bits (90), Expect = 6e-11 Identities = 88/114 (77%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| | ||| ||||| ||||| || | ||| |||||||||||||||||| || | | Sbjct 110822 CCTCCCCGCAGGCGCAGGACCAGGTGCAACGTTGACTCCTTCTGAATGTTGTAGTCGGAC 110763 Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 | | || || | || || | |||||||||||| || |||||||| ||||| || Sbjct 110762 AGAGTGCGGC-CATCTTCAAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTC 110710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397055262182950