Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq73 219 4e-52 >seq73 Length=89549 Score = 219 bits (242), Expect = 4e-52 Identities = 609/927 (66%), Gaps = 14/927 (2%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||| | |||||| ||| |||| | || || || |||||||| |||| Sbjct 16789 AACTACCAATACTTCGGCTTCAAGACTTTGGAAAGATCATATCTGCTCAAGAT---TGGC 16845 Query 93775 AGG---GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGC 93831 | || ||||| ||||||| || |||| ||||| || || | || || || || Sbjct 16846 AAACAAGTGGCCGAGAGACCGCAACACATGCTCATGCGTGTGGCAGTTGGCATCCATGGA 16905 Query 93832 CACGACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATG 93891 | ||||| ||| | | | | | || |||| | ||| | | ||| Sbjct 16906 GATGACATCGAGAAGGCGATAGAGACCTACAACCTCATGTCCCAGAAGTGCTTCACCCAC 16965 Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||| | || || |||||||| || || || ||| || || |||| || || ||| || Sbjct 16966 GCCTCTCCAACTCTGTTCAATGCCGGCACTCCGCAACCTCAATTGTCCTCATGCTTCTTG 17025 Query 93952 AT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010 | ||| | || | ||| ||| ||||||| ||||| |||||| ||||| | Sbjct 17026 GTCGAC-ATGAAAGAGGACAGCATTGAGGGAATTTACGACACTCTCAAGACTTGTGCTAT 17084 Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTC 94070 ||||| || || || || || || ||| | || | | ||||| | ||||| Sbjct 17085 GATCTCCAAGACTGCTGGCGGTATTGGCCTCAACGCTCATTGCATTCGTGCTACTGGTTC 17144 Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130 ||| || ||| ||||| ||||| ||||| || ||| | || ||||| || |||||||| Sbjct 17145 CTATATTGCCGGGACCAACGGCACTTCCAATGGTCTCATTCCCATGCTTCGTGTCTTCAA 17204 Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190 |||| | || || || |||||||||||||| | | | ||| | || || |||| Sbjct 17205 CAACACTGCCCGTTATGTGGACCAGGGTGGCAATAAGCGTCCCGGTGCCTTTGCCATCTA 17264 Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250 ||| ||||| ||||||||||| || | || | ||||| ||||||||||||| || Sbjct 17265 TCTGGAGCCATGGCACGCGGATGTCTTCGATTGGCTGAACCTGAGAAAGAACCACGGAAA 17324 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || || | ||| | ||| | || || || || ||| || || || || |||| Sbjct 17325 GGAAGAGGTTCGCGCCCGTGACTTGTTTTATGCACTTTGGACTCCGGATCTATTCATGAG 17384 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370 ||| |||||||| ||| | ||||| ||| || ||||| |||| || || || | Sbjct 17385 ACGTGTCGAGAAGAACCAAGACTGGACTCTGTTCTGTCCTCATGAGGCACCGGGCCTTGC 17444 Query 94371 CGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGA-ATCGCAGGGCAAGG 94429 || || | ||| | || || | | | |||| | || || | | || | ||| Sbjct 17445 TGATGTCTATGGCGAGGAATTCGATGCCCTCTATGAACAGTATGAGAAAGAGGGACGAGG 17504 Query 94430 CC--AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487 | || ||| | | || |||| ||||| || |||| | || | |||| || Sbjct 17505 TCGTCAGACGGTCA---AGGCCCAGAAGTTGTGGTATGCGATCCTAGAAGCACAGACCGA 17561 Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547 ||| || || || || || | | |||||| | |||| ||| ||||||| || | Sbjct 17562 GACCGGGACTCCTTATATGCTTTACAAGGATGCCTGCAACAAGAAGAGCAACCAGAAGAA 17621 Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607 ||| ||| ||| |||||| ||||||||||| || ||||||||||| | | | || || Sbjct 17622 CCTGGGGACAATCCGGAGCTCCAATCTGTGCACGGAAATTGTCGAGTACAGTGCCCCAGA 17681 Query 94608 CGAGATTGCTGTGTGTAACCTGGGCTC 94634 ||||| ||||| || || || | ||| Sbjct 17682 TGAGATCGCTGTCTGCAATCTCGCCTC 17708 Score = 96.9 bits (106), Expect = 3e-15 Identities = 198/292 (68%), Gaps = 2/292 (1%) Strand=Plus/Plus Query 95074 AAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAG 95133 ||||| ||||| ||| | || ||||| ||||| ||||| || || ||||| | || Sbjct 18136 AAACATGGTGTTCGCAACTCTCTCCTTGTTGCCCCTATGCCTACTGCATCCACCTCTCAA 18195 Query 95134 ATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTG 95193 ||| | ||||||||||| | ||||| || | ||| |||||| | ||| | | || ||| Sbjct 18196 ATCTTGGGCAACAACGAATGCTTCGAGCCATACACGTCCAACATCTACTCCCGTCGTGTG 18255 Query 95194 CTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGT 95253 | || || ||||||| ||| |||| ||| | ||| || || ||| Sbjct 18256 TTGGCTGGTGAATTCCAAGTCGTCAATCCCTGGCTCTTGAAGGATTTGGTTGACCTTGGT 18315 Query 95254 GTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCA-ACGGCTCCGTCCAGAACAT 95312 | ||| ||||| | |||||| | | | ||| | ||||||| | |||||||| Sbjct 18316 CTCTGGTCCGACAACATGAAGAACAGAAT-CATTGCGGAAGGCGGCTCCATTCAGAACAT 18374 Query 95313 CCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATC 95364 ||| | || || | |||||||| || || |||||||| || ||||| ||| Sbjct 18375 CCCCAACATCCCTGCTGACATCAAAGCTCTATACAAGACGGTCTGGGAAATC 18426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494714078541000