Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq883 145 5e-30 >seq883 Length=160511 Score = 145 bits (160), Expect = 5e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||||||||||| | || | ||| || || || || || || ||||| || |||| Sbjct 38144 TGCCACCTCGCAATCGGAGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGC 38085 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 ||||| ||| |||||||||||||||| |||||| | ||||| || |||||||| | Sbjct 38084 TGAGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCG 38025 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||||||||||||||| ||| || ||||||| | || || || || ||| | Sbjct 38024 GAATTCCTTCCTTGTCTTGAATCTTCGATTTTACATTGTCGATCGTGTCTGATGATTCCA 37965 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | || | || ||||| || || |||| || || ||||| ||||||||| Sbjct 37964 CTTCCAGTGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCATA 37915 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||| || || |||||||| |||||||| || |||||| | | ||||||| | ||| Sbjct 37890 TGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCTTCGAGTTGC 37831 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 ||||| || | || | ||| ||||||||| ||||| ||||||||||| || ||| Sbjct 37830 TTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCCTGGATCTTG 37771 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || |||||||| || || || | || ||||| || || || Sbjct 37770 GACTTCACATTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTA 37711 Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177 ||||| || || || ||||||||| Sbjct 37710 AGAGTCTTGACGAAGATTTGCATA 37687 Score = 89.7 bits (98), Expect = 4e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || ||||| | |||||| ||||| || ||||||||||| || | | | | || || Sbjct 37668 ACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACTCAAGGTGCGGCCATCCTCG 37609 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | |||||||| ||| | || | ||| ||||| || ||||| ||||||||||| | Sbjct 37608 AGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGA 37549 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || ||| |||||| | || || |||||||| || || || | ||| ||||| || Sbjct 37548 ATCTTGGACTTTACATTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTG 37489 Query 15148 CCTGTCA 15154 || |||| Sbjct 37488 CCGGTCA 37482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357385575320375