Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq883 145 5e-30
>seq883
Length=160511
Score = 145 bits (160), Expect = 5e-30
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007
||||||||||||||| | || | ||| || || || || || || ||||| || ||||
Sbjct 38144 TGCCACCTCGCAATCGGAGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGC 38085
Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
||||| ||| |||||||||||||||| |||||| | ||||| || |||||||| |
Sbjct 38084 TGAGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCG 38025
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
|||||||||||||||| ||| || ||||||| | || || || || ||| |
Sbjct 38024 GAATTCCTTCCTTGTCTTGAATCTTCGATTTTACATTGTCGATCGTGTCTGATGATTCCA 37965
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| || | || ||||| || || |||| || || ||||| |||||||||
Sbjct 37964 CTTCCAGTGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCATA 37915
Score = 116 bits (128), Expect = 3e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
||||| || || |||||||| |||||||| || |||||| | | ||||||| | |||
Sbjct 37890 TGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCTTCGAGTTGC 37831
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
||||| || | || | ||| ||||||||| ||||| ||||||||||| || |||
Sbjct 37830 TTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCCTGGATCTTG 37771
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
|| ||| | || || |||||||| || || || | || ||||| || || ||
Sbjct 37770 GACTTCACATTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTA 37711
Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177
||||| || || || |||||||||
Sbjct 37710 AGAGTCTTGACGAAGATTTGCATA 37687
Score = 89.7 bits (98), Expect = 4e-13
Identities = 132/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| ||||| | |||||| ||||| || ||||||||||| || | | | | || ||
Sbjct 37668 ACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACTCAAGGTGCGGCCATCCTCG 37609
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| |||||||| ||| | || | ||| ||||| || ||||| ||||||||||| |
Sbjct 37608 AGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGA 37549
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| ||| |||||| | || || |||||||| || || || | ||| ||||| ||
Sbjct 37548 ATCTTGGACTTTACATTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTG 37489
Query 15148 CCTGTCA 15154
|| ||||
Sbjct 37488 CCGGTCA 37482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357385575320375
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |