Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq377 107 2e-18
seq883 104 2e-17
>seq377
Length=202478
Score = 107 bits (118), Expect = 2e-18
Identities = 247/368 (67%), Gaps = 23/368 (6%)
Strand=Plus/Plus
Query 47221 TTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCA 47280
||||||| ||| | ||||| || ||||| |||||| | || || || |||| |||
Sbjct 90935 TTATGCCAGGCTTGACGTTCTCGAATGAGCTCATCTCGCGTGATGAGGGTATGCATACCG 90994
Query 47281 ACTTTGCCTGTCT-CTACTACAACACTAGAGTCGATCAAAAGTTGGACGTGCCCACCGTC 47339
||||||| ||||| || | |||||| || | | ||| || |||| ||
Sbjct 90995 ACTTTGCTTGTCTTCTGATGCAACACC----TCAAGTATAAGCCCGAT---CCCAAACTC 91047
Query 47340 AGCGA---CATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTG 47396
| ||| ||| | |||| || || | ||| |||| ||| ||||| | || ||| ||
Sbjct 91048 ATCGAGGACATCATCACCGAGGCTGTTGTCATCGAGAAGGAATTTTTGACAGATGCTTTG 91107
Query 47397 CCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCC 47456
|| | || | | || |||||||| | ||||| | | || || || || || |||
Sbjct 91108 CCTGTCGCTCTGCTTGGCATGAACGCCAAACTGATGCAACAATATATTGAGTTCGTTGCC 91167
Query 47457 GACCGCCTGCTCGTTCAGCT---AAAGTATCCCAAGATTTACCACA---CCGAGAATCCA 47510
||||| || ||| || || ||| ||||| ||| ||| || |||||||
Sbjct 91168 GACCGTCTTCTCCTTGCCCTCGGAAA------CAAGAAGTACTACAATGCCCAGAATCCT 91221
Query 47511 TTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTC 47570
||| |||||| ||||||| || | | ||| ||||| ||||| ||||||||||| |||
Sbjct 91222 TTCAGCTTTATGGACAACATCTCATTGGCGGGAAAGACAAACTTCTTCGAGAAGCGTGTC 91281
Query 47571 GGCGAATA 47578
|| || ||
Sbjct 91282 GGTGATTA 91289
>seq883
Length=160511
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || |||||||||||| | || ||| || ||||||||||| ||
Sbjct 38370 CCACCACGAAGTCTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAA 38311
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || | || || || || ||||||||||||| ||||| || ||
Sbjct 38310 AGAGTGCGTCCATCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGA 38251
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| ||||| || ||| ||| || ||||| |||| || | ||||||| | || ||
Sbjct 38250 ATACCCTCTTTATCCTGGATCTTTGACTTGACGTTG-TCAATAGTGTCCGAAGATTCAAC 38192
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
||| | || | || || ||||||| || || ||||| |||||||||
Sbjct 38191 TTCCAACGTAATAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCATG 38143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475492032954000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |