Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq883 134 1e-26 seq73 87.8 2e-12 >seq883 Length=160511 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || ||||| || || || ||||| ||||| ||||| ||||||| ||| | || || Sbjct 38124 ACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGCTGAGAGTTCGACCGTCTTCT 38065 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 ||||||||||| ||| | ||||||||||| |||||||||||||| ||||| || |||||| Sbjct 38064 AATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCGGAATTCCTTCCTTGTCTTGA 38005 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 || || ||| | || | ||||| || || || ||||| || || | || ||| Sbjct 38004 ATCTTCGATTTTACATTGTCGATCGTGTCTGATGATTCCACTTCCAGTGTGATGGTCTTG 37945 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | || || ||||| |||||||| Sbjct 37944 CCAGTCAAGGTCTTGACAAAGATTTGCAT 37916 >seq73 Length=89549 Score = 87.8 bits (96), Expect = 2e-12 Identities = 191/286 (67%), Gaps = 0/286 (0%) Strand=Plus/Plus Query 124038 TGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGA 124097 |||||||| || || || || | || || | || | ||||||||||| | | Sbjct 17998 TGCGAACTCGCCAAGGAACAAGGTCCCTATGAGACCTATGAGGGCAGCCCGGTCTCACAA 18057 Query 124098 GGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTT 124157 ||||| | ||||| || |||||||||| ||| || || || | ||||| ||| | Sbjct 18058 GGTATCCTTCAGTATGATATGTGGAATGTTACTCCTTCAGATCTATGGGATTGGGATGCA 18117 Query 124158 TTAAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCG 124217 || ||| || | | || ||| | || ||||| || | || || ||||| Sbjct 18118 TTGAAAGCTGAGATTGCTAAACATGGTGTTCGCAACTCTCTCCTTGTTGCCCCTATGCCT 18177 Query 124218 ACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAAT 124277 || ||| |||| ||||||| || || |||||||||| ||||||||| | ||| ||| Sbjct 18178 ACTGCATCCACCTCTCAAATCTTGGGCAACAACGAATGCTTCGAGCCATACACGTCCAAC 18237 Query 124278 TTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATAAATC 124323 | ||| || || ||||| || || || || ||||| | |||| Sbjct 18238 ATCTACTCCCGTCGTGTGTTGGCTGGTGAATTCCAAGTCGTCAATC 18283 Score = 86.0 bits (94), Expect = 6e-12 Identities = 173/254 (68%), Gaps = 2/254 (1%) Strand=Plus/Plus Query 122916 CAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGACATCGAAAACGCGACC 122975 ||||| ||||||||||| || || | ||| | || ||| |||||||| || |||| Sbjct 16867 CAACACATGCTCATGCGTGTGGCAGTTGGCATCCATGGAGATGACATCGAGAAGGCGATA 16926 Query 122976 GAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGTCCCACTTTGTTCGCC 123035 || || ||| | | ||||| || || | ||||| ||||| ||| ||| ||||| Sbjct 16927 GAGACCTACAACCTCATGTCCCAGAAGTGCTTCACCCACGCCTCTCCAACTCTGTTCAAT 16986 Query 123036 GCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACCTTGCGCGAAGACAGC 123095 |||||||| | ||||| ||||| || || || ||| || | || || |||||| Sbjct 16987 GCCGGCACTCCGCAACCTCAATTGTCCTCATGCTTCTTGGTCGACATGAAAGAGGACAGC 17046 Query 123096 ATCACCGGTATCTATGAAACTTTGCGCGA-TTGCGCGTTGATTTCCAAATTTGGCGGCGG 123154 || || || || || ||| | | || ||| || |||| ||||| || ||||| Sbjct 17047 ATTGAGGGAATTTACGACACTCT-CAAGACTTGTGCTATGATCTCCAAGACTGCTGGCGG 17105 Query 123155 CATAGGCGTGAACG 123168 || ||| | |||| Sbjct 17106 TATTGGCCTCAACG 17119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451994866191000