Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq883 134 1e-26
seq73 87.8 2e-12
>seq883
Length=160511
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| ||||| || || || ||||| ||||| ||||| ||||||| ||| | || ||
Sbjct 38124 ACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGCTGAGAGTTCGACCGTCTTCT 38065
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
||||||||||| ||| | ||||||||||| |||||||||||||| ||||| || ||||||
Sbjct 38064 AATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCGGAATTCCTTCCTTGTCTTGA 38005
Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311
|| || ||| | || | ||||| || || || ||||| || || | || |||
Sbjct 38004 ATCTTCGATTTTACATTGTCGATCGTGTCTGATGATTCCACTTCCAGTGTGATGGTCTTG 37945
Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | || || ||||| ||||||||
Sbjct 37944 CCAGTCAAGGTCTTGACAAAGATTTGCAT 37916
>seq73
Length=89549
Score = 87.8 bits (96), Expect = 2e-12
Identities = 191/286 (67%), Gaps = 0/286 (0%)
Strand=Plus/Plus
Query 124038 TGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGA 124097
|||||||| || || || || | || || | || | ||||||||||| | |
Sbjct 17998 TGCGAACTCGCCAAGGAACAAGGTCCCTATGAGACCTATGAGGGCAGCCCGGTCTCACAA 18057
Query 124098 GGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTT 124157
||||| | ||||| || |||||||||| ||| || || || | ||||| ||| |
Sbjct 18058 GGTATCCTTCAGTATGATATGTGGAATGTTACTCCTTCAGATCTATGGGATTGGGATGCA 18117
Query 124158 TTAAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCG 124217
|| ||| || | | || ||| | || ||||| || | || || |||||
Sbjct 18118 TTGAAAGCTGAGATTGCTAAACATGGTGTTCGCAACTCTCTCCTTGTTGCCCCTATGCCT 18177
Query 124218 ACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAAT 124277
|| ||| |||| ||||||| || || |||||||||| ||||||||| | ||| |||
Sbjct 18178 ACTGCATCCACCTCTCAAATCTTGGGCAACAACGAATGCTTCGAGCCATACACGTCCAAC 18237
Query 124278 TTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATAAATC 124323
| ||| || || ||||| || || || || ||||| | ||||
Sbjct 18238 ATCTACTCCCGTCGTGTGTTGGCTGGTGAATTCCAAGTCGTCAATC 18283
Score = 86.0 bits (94), Expect = 6e-12
Identities = 173/254 (68%), Gaps = 2/254 (1%)
Strand=Plus/Plus
Query 122916 CAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGACATCGAAAACGCGACC 122975
||||| ||||||||||| || || | ||| | || ||| |||||||| || ||||
Sbjct 16867 CAACACATGCTCATGCGTGTGGCAGTTGGCATCCATGGAGATGACATCGAGAAGGCGATA 16926
Query 122976 GAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGTCCCACTTTGTTCGCC 123035
|| || ||| | | ||||| || || | ||||| ||||| ||| ||| |||||
Sbjct 16927 GAGACCTACAACCTCATGTCCCAGAAGTGCTTCACCCACGCCTCTCCAACTCTGTTCAAT 16986
Query 123036 GCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACCTTGCGCGAAGACAGC 123095
|||||||| | ||||| ||||| || || || ||| || | || || ||||||
Sbjct 16987 GCCGGCACTCCGCAACCTCAATTGTCCTCATGCTTCTTGGTCGACATGAAAGAGGACAGC 17046
Query 123096 ATCACCGGTATCTATGAAACTTTGCGCGA-TTGCGCGTTGATTTCCAAATTTGGCGGCGG 123154
|| || || || || ||| | | || ||| || |||| ||||| || |||||
Sbjct 17047 ATTGAGGGAATTTACGACACTCT-CAAGACTTGTGCTATGATCTCCAAGACTGCTGGCGG 17105
Query 123155 CATAGGCGTGAACG 123168
|| ||| | ||||
Sbjct 17106 TATTGGCCTCAACG 17119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451994866191000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |