Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq73 215 6e-51 >seq73 Length=89549 Score = 215 bits (238), Expect = 6e-51 Identities = 928/1448 (64%), Gaps = 33/1448 (2%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 |||||||||||||| || ||||| |||||| ||||||| || | ||||| || | Sbjct 18587 CGGAGGTAGTACATTCCAGTCTTCAGCCCCATCTTCCAGCCAGCGAAGTGCATGGATGTG 18528 Query 115618 AACTTGGAGAGTGTTGGA--CTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGA 115675 | |||| | || || ||| ||| || ||| | | |||||||||||| |||| Sbjct 18527 ATCTTGCCCATAGTGGGCTCCTTGAGATG--GATGTTGAGAGATTGGGATTGATCAATGA 18470 Query 115676 AGCGTCCCCGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTCCCACACAGTT 115734 | || || || || ||||| | | || | | | || ||||||||| || || Sbjct 18469 AAGCACCACGGTCAGCAGCCATCTGGAGGACGGTGCGTTGGCT-GATTTCCCAGACCGTC 18411 Query 115735 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCC 115794 |||| || || || ||| | ||||| | ||| || || || ||||| ||| || Sbjct 18410 TTGTATAGAGCTTTGATGTCAGCAGGGATGTTGGGGATGTTCTGAATGGAGCCGCCTTCC 18351 Query 115795 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACG 115854 | || | |||||| | | ||||||||||||| | | ||||| || | Sbjct 18350 GCAATGATTCTGTTCTTCATGTTGTCGGACCAGAGACCAAGGTCAACCAAATCCTTCAAG 18291 Query 115855 AGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTC 115914 || |||||| || || ||||| || | || | |||||||||| | Sbjct 18290 AGCCAGGGATTGACGACTTGGAATTCACCAGCCAACACACGACGGGAGTAGATGTTGGAC 18231 Query 115915 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 115974 ||||||||||| ||||| || ||||| ||||||||||| | ||||| || || ||||| Sbjct 18230 GTGTATGGCTCGAAGCATTCGTTGTTGCCCAAGATTTGAGAGGTGGATGCAGTAGGCATA 18171 Query 115975 GGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCC 116034 || || | || || |||||| | ||| ||| | || | || ||| Sbjct 18170 GGGGCAACAAGGAGAGAGTTGCGAACACCATGTTTAGCAATCTCAGCTTTCAATGCATCC 18111 Query 116035 CAGTCGTAGTTGAGCTTT-GTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGA 116093 || || | | || || | | | |||||||||| |||| ||||||||||| || Sbjct 18110 CAATCCCA-TAGATCTGAAGGAGTAACATTCCACATATCATACTGAAGGATACCTTGTGA 18052 Query 116094 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGC 116153 | || |||||| | |||||||| || || | ||| || | |||| | ||| Sbjct 18051 GACCGGGCTGCCCTCATAGGTCTCATAGGGACCTTGTTCCTTGGCGAGTTCGCATGACGC 17992 Query 116154 CTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-TTGCCTTGGCCTCGT 116212 || ||||| || || || || || ||||| | || | ||| | |||||| Sbjct 17991 AGTCAGAGCTGCATGGTAGATGGTTTCGAAAATTTGGATGTTGAGTTGACG-GGCCTCTG 17933 Query 116213 CGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGC 116272 || || || | ||||| | || || |||| || ||||| || ||||| || | Sbjct 17932 GAGAGTCGAAAGGAAGACGCAAAGCAAGGAAGGCATCTGCAAGACCCTGAACACCAAGAC 17873 Query 116273 CAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTAT 116332 ||| || || |||| | || ||| | || ||| || || | || ||| Sbjct 17872 CAACAGGTCGGTGTCGGAAGTTGCTCTTCCTGGCTTCGGGCACAGGGTAGTAGTTGATAT 17813 Query 116333 CGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAAT 116392 |||| | | | || | ||| ||||| || | || | ||||||||| | | | Sbjct 17812 CGATGATCTTGTTCAAGTTTCGAGTGACGACTTGGGTAACTTCATGAAGACGGCCAAAGT 17753 Query 116393 CAAA---ACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTAC 116449 || | || || | ||| || ||| | | ||||| || | || || ||||| | Sbjct 17752 CATATTCACCTCGGG---CTTGATCGACGAAGGTTGGAAGAGCCAGAGAGGCGAGATTGC 17696 Query 116450 ACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCT 116509 | |||| | ||||||| || ||||||| | ||||||||| |||| ||| || ||| Sbjct 17695 AGACAGCGATCTCATCTGGGGCACTGTACTCGACAATTTCCGTGCACAGATTGGAGCTCC 17636 Query 116510 TAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATAT 116569 || || |||| |||||| || || ||| |||| || ||||||||||| ||||||| Sbjct 17635 GGATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATAT 17576 Query 116570 ATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA-TACATCGGCGGCTGGC 116628 | || ||||| ||||| || || | | || || || | ||| || || | | || | Sbjct 17575 AAGGAGTCCCGGTCTCGGTCTGTGCTTCTAGGATCGCATACCACAACTTCTGGGCCTTG- 17517 Query 116629 ACAG--TGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTT 116686 || | || || |||| ||||| | ||| |||| | |||||||| || || || | Sbjct 17516 ACCGTCTGACG--ACCTCGTCCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCT 17459 Query 116687 CACCCACAG-CCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCA 116745 | ||| || | || | || || ||||||| || |||||||| |||| ||| | Sbjct 17458 C-GCCATAGACATCAGCAAGGCCCGGTGCCTCATGAGGACAGAACAGAGTCCAGTCTTGG 17400 Query 116746 CCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGA 116805 || ||| || || ||||||| || || || |||| || || | || | || || Sbjct 17399 TTCTTCTCGACACGTCTCATGAATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGG 17340 Query 116806 CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCG 116865 |||| | ||||| | || || || | || | || | || | || ||||||| Sbjct 17339 GCGCGAACCTCTTCCTTTCCGTGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCG 17280 Query 116866 TGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG------ACCAGCCTGGTTT 116919 ||||| || ||||| || | || | | || | |||| ||| |||||| Sbjct 17279 TGCCATGGCTCCAGATAGATGGCAAAGGCACC---GGGACGCTTATTGCCACCCTGGTCC 17223 Query 116920 ACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCA 116979 ||||| | || || ||| || || |||||||| ||||||| ||||| || ||| Sbjct 17222 ACATAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAGACCATTGGAAGTGCCG 17163 Query 116980 TTTGTCCC 116987 || ||||| Sbjct 17162 TTGGTCCC 17155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613495888461000