Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq883 118 1e-21
seq256 98.7 1e-15
seq1350 96.9 4e-15
>seq883
Length=160511
Score = 118 bits (130), Expect = 1e-21
Identities = 156/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440
|||||||| ||||| || |||||||| || ||||||||||| || |||||||| | ||
Sbjct 38356 CAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGTCCATC 38297
Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|| | |||||||| || || ||||| ||||| || || | || | | ||| || ||
Sbjct 38296 TTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCTTTATC 38237
Query 46501 CATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGG 46559
| |||||| ||||| ||| | | | ||||| ||||| || |||| ||| || |
Sbjct 38236 CTGGATCTTTGACTTGA-CGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTAATAG 38178
Query 46560 TTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| || || |||| || || |||||||| |||||
Sbjct 38177 TCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 38144
Score = 105 bits (116), Expect = 8e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
|| |||||||| |||||||| |||||||| |||| ||||| ||||||||||| ||
Sbjct 37878 TCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCAAAA 37819
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|| | || || ||||||| || | | ||||||||| |||||| ||| | |
Sbjct 37818 ATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCCTGGATCTTGGACTTCACATTG 37759
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | || ||||| || || || || | |||||||| ||||| || || || || ||
Sbjct 37758 TCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACG 37699
Query 46583 AAGATTTGCAT 46593
|||||||||||
Sbjct 37698 AAGATTTGCAT 37688
Score = 105 bits (116), Expect = 8e-18
Identities = 163/231 (71%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
|||| |||| || || | || ||||| | || |||||| ||||| || ||||||
Sbjct 38144 TGCCACCTCGCAATCGGAGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGC 38085
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
||||| || |||| || | || || || ||||| ||||| || || ||||| | ||
Sbjct 38084 TGAGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCG 38025
Query 46485 GCACGCTCTCCTTGTCCATGATCTTC--TTCTTGAGCGTCGCCACCGTGTCGCTCGATTC 46542
| | | |||||||| |||||| || | | |||| | |||||| |||||
Sbjct 38024 GAATTCCTTCCTTGTCTTGAATCTTCGATTTTACATTGTCG--ATCGTGTCTGATGATTC 37967
Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| |||| |||||||| ||||| |||| || || ||||||||||||||
Sbjct 37966 CACTTCCAGTGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 37916
>seq256
Length=205955
Score = 98.7 bits (108), Expect = 1e-15
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| ||||| ||||| || |||||| || || ||||||||||| |||||||| |
Sbjct 110810 CGCAGGACCAGGTGCAACGTTGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCA 110751
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| || || |||||||||||||| |||| ||| |||||||| | || | || ||||||
Sbjct 110750 TCTTCAAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCAGGAGGGATGCCTTCCTTG 110691
Query 46499 TC 46500
||
Sbjct 110690 TC 110689
>seq1350
Length=234104
Score = 96.9 bits (106), Expect = 4e-15
Identities = 138/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||||||||| ||||| || || || || | || || || |||||||||||||| |
Sbjct 96582 CCTTTTGGATGTTGTAATCACTCAGTGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 96523
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
|||||||||| ||||| | || | || ||||| || |||||| ||||| ||| |
Sbjct 96522 TCAAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTATCTTGGATCTTGGACTTGA-CGTTG 96464
Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | || ||| ||| || || || | |||||||| |||||||| || || || ||
Sbjct 96463 TCGATTGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 96404
Query 46583 AAGATTTGCATT 46594
||| | ||| ||
Sbjct 96403 AAGCTGTGCGTT 96392
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565227978417000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |