Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq883 118 1e-21 seq256 98.7 1e-15 seq1350 96.9 4e-15 >seq883 Length=160511 Score = 118 bits (130), Expect = 1e-21 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440 |||||||| ||||| || |||||||| || ||||||||||| || |||||||| | || Sbjct 38356 CAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGTCCATC 38297 Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 || | |||||||| || || ||||| ||||| || || | || | | ||| || || Sbjct 38296 TTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCTTTATC 38237 Query 46501 CATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGG 46559 | |||||| ||||| ||| | | | ||||| ||||| || |||| ||| || | Sbjct 38236 CTGGATCTTTGACTTGA-CGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTAATAG 38178 Query 46560 TTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || |||| || || |||||||| ||||| Sbjct 38177 TCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 38144 Score = 105 bits (116), Expect = 8e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || |||||||| |||||||| |||||||| |||| ||||| ||||||||||| || Sbjct 37878 TCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCAAAA 37819 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | || || ||||||| || | | ||||||||| |||||| ||| | | Sbjct 37818 ATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCCTGGATCTTGGACTTCACATTG 37759 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | || ||||| || || || || | |||||||| ||||| || || || || || Sbjct 37758 TCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACG 37699 Query 46583 AAGATTTGCAT 46593 ||||||||||| Sbjct 37698 AAGATTTGCAT 37688 Score = 105 bits (116), Expect = 8e-18 Identities = 163/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| |||| || || | || ||||| | || |||||| ||||| || |||||| Sbjct 38144 TGCCACCTCGCAATCGGAGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGC 38085 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 ||||| || |||| || | || || || ||||| ||||| || || ||||| | || Sbjct 38084 TGAGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCG 38025 Query 46485 GCACGCTCTCCTTGTCCATGATCTTC--TTCTTGAGCGTCGCCACCGTGTCGCTCGATTC 46542 | | | |||||||| |||||| || | | |||| | |||||| ||||| Sbjct 38024 GAATTCCTTCCTTGTCTTGAATCTTCGATTTTACATTGTCG--ATCGTGTCTGATGATTC 37967 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| |||| |||||||| ||||| |||| || || |||||||||||||| Sbjct 37966 CACTTCCAGTGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 37916 >seq256 Length=205955 Score = 98.7 bits (108), Expect = 1e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| ||||| ||||| || |||||| || || ||||||||||| |||||||| | Sbjct 110810 CGCAGGACCAGGTGCAACGTTGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCA 110751 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || || |||||||||||||| |||| ||| |||||||| | || | || |||||| Sbjct 110750 TCTTCAAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCAGGAGGGATGCCTTCCTTG 110691 Query 46499 TC 46500 || Sbjct 110690 TC 110689 >seq1350 Length=234104 Score = 96.9 bits (106), Expect = 4e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||||||||| ||||| || || || || | || || || |||||||||||||| | Sbjct 96582 CCTTTTGGATGTTGTAATCACTCAGTGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 96523 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 |||||||||| ||||| | || | || ||||| || |||||| ||||| ||| | Sbjct 96522 TCAAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTATCTTGGATCTTGGACTTGA-CGTTG 96464 Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | || ||| ||| || || || | |||||||| |||||||| || || || || Sbjct 96463 TCGATTGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 96404 Query 46583 AAGATTTGCATT 46594 ||| | ||| || Sbjct 96403 AAGCTGTGCGTT 96392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565227978417000