Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq883 95.1 8e-15 >seq883 Length=160511 Score = 95.1 bits (104), Expect = 8e-15 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 39511 ACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCC 39570 |||||||||| |||||| || || || ||||| || || | | | |||| |||| ||| Sbjct 38352 ACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGTCCATCTTCC 38293 Query 39571 AATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCAT 39630 ||||| || || |||| || || ||||| ||||||| || | || ||||| || Sbjct 38292 AATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCTTTATCCTGG 38233 Query 39631 ATTTTTTGTTTAATCGTCGCTACT-GTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTT 39689 || ||| || | ||| | | | ||||| | ||| || ||||| ||||| || || Sbjct 38232 ATCTTTGACTTGA-CGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTAATAGTCTT 38174 Query 39690 ACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 || || || || || || |||||||||||| Sbjct 38173 TCCGGTCAAGGTCTTGACAAAGATCTGCATG 38143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347363355488675