Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq883 96.9 1e-14 seq1160 86.0 2e-11 >seq883 Length=160511 Score = 96.9 bits (106), Expect = 1e-14 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || ||||||| || || || || || || || |||||||| Sbjct 37916 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATCACACTGGAAGTGGAATCATCA 37975 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | ||| || |||||||| |||||||||||||| || || ||| Sbjct 37976 GACACGATCGACAATGTAAAATCGAAGATTCAAGACAAGGAAGGAATTCCGCCGGACCAA 38035 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| || || ||| | || |||||| | ||||| || ||||| | || ||||| Sbjct 38036 CAACGATTGATCTTCGCTGGAAAACAATTAGAAGACGGTCGAACTCTCAGCGACTATAAC 38095 Query 391230 ATTGATAAGGA 391240 || | ||||| Sbjct 38096 ATCCAGAAGGA 38106 Score = 86.0 bits (94), Expect = 2e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 391134 AAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAA 391193 || ||||| || |||||||| ||||||||||||||||||||| | |||||| | || ||| Sbjct 37544 AAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAACAACGTCTCATTTTCGCCGGCAAA 37603 Query 391194 CAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGA 391240 || || || ||||| | || ||| ||||| || ||| | || || Sbjct 37604 CAGCTCGAGGATGGCCGCACCTTGAGTGATTACAACATTCAGAAAGA 37650 >seq1160 Length=134009 Score = 86.0 bits (94), Expect = 2e-11 Identities = 238/362 (66%), Gaps = 6/362 (2%) Strand=Plus/Minus Query 451242 CTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA 451301 |||| ||||||||||| | |||||| | || ||||| || ||||| ||| Sbjct 80244 CTCCCGAAGAAATTTCGGCCATGGTTTTGGGCAAGATGAAGGAGGTCGCAGAGGCATACC 80185 Query 451302 TTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAAC 451361 | || ||| || | ||||| | || ||||| || || ||||| || || Sbjct 80184 TGGGCGAGAAAGTCACCCACGCAGTGGTCACGGTTCCGGCATACTTCAACGACAACCAGA 80125 Query 451362 GGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421 | || || || ||||| || || ||||||||||| | |||||| ||| | | |||| Sbjct 80124 GACAGGCGACCAAAGACGCTGGTACCATTGCTGGTTTGACTGTTCTCCGAGTGGTCAATG 80065 Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaa 451481 |||| || || || || | || || || | ||| || || | || |||| | Sbjct 80064 AACCCACTGCCGCCGCAATCGCCTACGGTTT-GGACAAG--AAGGGAA---AAGAGAGCC 80011 Query 451482 aTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG 451541 | || | || | ||| ||||||| || || ||| || | || || ||||||| Sbjct 80010 AGATCATCGTCTACGATCTTGGTGGTGGTACATTCGATGTCTCACTCCTCTCGATTGAAG 79951 Query 451542 ATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTG 451601 |||| || || || || ||| ||| ||||||||||||||| || || || ||| ||| Sbjct 79950 ATGGTGTTTTCGAGGTCTTGGCGACCGCTGGTGATACTCATCTGGGTGGGGAGGATTTTG 79891 Query 451602 AT 451603 || Sbjct 79890 AT 79889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975681062009300