Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq994 118 8e-21 seq956 95.1 9e-14 >seq994 Length=146303 Score = 118 bits (130), Expect = 8e-21 Identities = 414/640 (65%), Gaps = 10/640 (2%) Strand=Plus/Minus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 || || || || ||||| || ||||| |||| | ||||| || | || | | ||| Sbjct 81663 ACGAGGCGGTTGTCAAAGTCCTCACCACCCAGGTGAGTATCACCAGCAGTGGACTTGACT 81604 Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134 | ||| | || ||||||| | ||| || | ||||| || |||||||| | ||| Sbjct 81603 TCGAAGATACCCTCTTCAATGGTCAAGAGCGACACATCGAAAGTACCACCACCAAGATCG 81544 Query 518135 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194 || || | || || || || || ||||||||||| || |||| ||||| Sbjct 81543 AAGATCAAGACGTTGCGCTCACCCTCAGCCTTCTTATCAAGACCGTAGGCAATGGCAGCC 81484 Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254 || || ||||| || || || | | ||||| ||||| ||||| || ||||| || Sbjct 81483 GCGGTGGGTTCGTTGATGATACGGAGGACATTGAGACCGGCAATGAGACCGGCATCCTTG 81424 Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTAC- 518313 |||||||| | || || ||||| || |||||||| ||||| || || || | | || Sbjct 81423 GTGGCTTGACGCTGAGAGTCGTTGAAGTATGCAGGGACAGTGATGACAGCGTTGTTGACC 81364 Query 518314 -TTCTTTACCAATATAAGCGCTT--GCCGTTTGTTTCATTTTACTTAAAATCATTGATGA 518370 | | | |||| ||| || || || |||| | |||| || | || | ||| ||||| Sbjct 81363 GTACCT--CCAAGATA--CGATTCAGCGGTTTCTCTCATCTTGGTCAACACCATGGATGA 81308 Query 518371 AATTTGTTCTGGGGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTT 518429 |||| ||| || | |||| || || |||| | ||||||| || | Sbjct 81307 GATTTCTTCGGGAGTGAATTGTTTTATCTCGCCCTTGA-ACTCCACTTCAACGACGGGCT 81249 Query 518430 TATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGT 518489 | ||| | | ||| || ||||| ||| ||||||||| | ||||| | | Sbjct 81248 TGCCACCCTTGTCGACAACCTTGAATGGGAAGTGTTTCATATCAGCCTGAACTTCAGGAT 81189 Query 518490 CATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTG 518549 |||| || | | || || || || || || ||||| | || || || || || | Sbjct 81188 CATTGAACTTCCGGCCGATCAAGCGCTTGGCGTCAAAGACGGTGTTCTGGGGGTTCATGG 81129 Query 518550 CAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATG 518609 || |||| | || || | || ||||| ||| | || || || ||||| | || | | Sbjct 81128 CAACTTGGTTCTTCGCGGAGTCACCAATGAGACGCTCGGTGTCGGTAAAGGCGACGAAGG 81069 Query 518610 ATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTC 518649 | ||||| || || || || || || || ||||| || || Sbjct 81068 AGGGAGTGGTTCGGTTGCCCTGGTCGTTGGCAATGATCTC 81029 >seq956 Length=21473 Score = 95.1 bits (104), Expect = 9e-14 Identities = 191/283 (67%), Gaps = 3/283 (1%) Strand=Plus/Plus Query 518025 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 518084 |||| ||||| | ||||||| | |||| |||| ||||| | || ||||| | Sbjct 18416 TATCGAAATCCTGTCCTCCCAGGTGGGTATCACCTGCGGTAGCCTTGACAGTGAAAACAC 18475 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 || ||| || ||| || | ||||| || |||||||| | |||| | || || | Sbjct 18476 CACCTTGAATGTTCAAGAGGGAGACATCGAAAGTGCCACCACCGAGATCATAGATCAGAA 18535 Query 518145 CATTCATTTCTTTGTCTTGGTTTTTATCA---AGACCATACGCAAAAGCAGCAGCAGTTG 518201 | || ||| ||||| || | | ||||| || |||| |||||| || || | Sbjct 18536 CGTTTCGTTCCTTGTCAGACTTGCCAGAACCGAGACCGTAGGCAATAGCAGCCGCGGTAG 18595 Query 518202 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 518261 | || || || || | | ||| || ||||| ||||| || ||||| || ||||||| Sbjct 18596 GCTCGTTGATGATGCGGAGAACGTTGAGACCGGCAATGGCACCGGCATCCTTGGTGGCTT 18655 Query 518262 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 ||||||| ||||| || || || |||||||| ||||| || Sbjct 18656 GTCTTTGATTGTCGTTGAAGTAGGCGGGAACAGTGATAACAGC 18698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780749205641350