Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq73 205 1e-47 >seq73 Length=89549 Score = 205 bits (226), Expect = 1e-47 Identities = 882/1383 (64%), Gaps = 25/1383 (2%) Strand=Plus/Plus Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678 ||||| ||||||| || || | || |||||||| || || || || | | |||| Sbjct 16871 ACATGCTCATGCGTGTGGCAGTTGGCATCCATGGAGATGACATCGAGAAGGCGATAGAGA 16930 Query 111679 CATACGACAAGATGTCCCGTGGTATG-TTCATCCACGCAACACCAACCCTCTTCAACGCT 111737 | ||| || ||||||| | || |||| |||||| | ||||| || ||||| || Sbjct 16931 CCTACAACCTCATGTCCCA-GAAGTGCTTCACCCACGCCTCTCCAACTCTGTTCAATGCC 16989 Query 111738 GGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATC 111797 || || || ||| ||| ||||| || ||| | | | | || ||||| || Sbjct 16990 GGCACTCCGCAACCTCAATTGTCCTCATGCTTCTTGGTCGACATGAAAGAGGACAGCATT 17049 Query 111798 AATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATC 111857 | || ||||||| |||||||| ||||| ||||| ||| ||||| ||||| Sbjct 17050 GAGGGAATTTACGACACTCTCAAGACTTGTGCTATGATCTCCAAGACTGCTGGCGGTATT 17109 Query 111858 GGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAATGGTCAA 111917 || | || ||| | | || | || |||| || || || || Sbjct 17110 GGCCTCAACGCTCATTGCATTCGTGCTACTGGTTCCTATATTGCCGGGACCAACGGCACT 17169 Query 111918 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAA 111977 || ||||| | ||||| |||||||| || || ||| ||| || || ||||| |||| Sbjct 17170 TCCAATGGTCTCATTCCCATGCTTCGTGTCTTCAACAACACTGCCCGTTATGTGGACCAG 17229 Query 111978 GCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGAT 112031 | ||| ||||| | || | | || ||||||| |||||||||||||||||| Sbjct 17230 GGTGGCAATAAGCGTCCC---GGTGCCTTTGCCATCTATCTGGAGCCATGGCACGCGGAT 17286 Query 112032 ATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGAT 112091 || | || | || | || | ||||| || | || |||| || ||| || Sbjct 17287 GTCTTCGATTGGCTGAACCTGAGAAAGAACCACGGAAAGGAAGAGGTTCGCGCCCGTGAC 17346 Query 112092 CTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAAT 112151 | || | || || |||| ||| ||||| ||||||| | || ||| ||| | Sbjct 17347 TTGTTTTATGCACTTTGGACTCCGGATCTATTCATGAGACGTGTCGAGAAGAACCAAGAC 17406 Query 112152 TGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTT 112211 ||| |||| || ||||| | ||||||| || || | |||| | || ||||| || Sbjct 17407 TGGACTCTGTTCTGTCCTCATGAGGCACCGGGCCTTGCTGATGTCTATGGCGAGGAATTC 17466 Query 112212 GAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCC 112271 || |||||||| | |||| ||| |||| | || | | |||||| | || | Sbjct 17467 GATGCCCTCTATGAACAGTATGAGAAAGAGGGACGAGGTCGTCAGACGGT-CAAGGCCCA 17525 Query 112272 GATGT-GTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTA 112330 || || |||| | || || || | | || |||||||| || || || ||||||||||| Sbjct 17526 GAAGTTGTGGTATGCGATCCTAGAAGCACAGACCGAGACCGGGACTCCTTATATGCTTTA 17585 Query 112331 CAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAA 112390 ||| || ||||| ||| | ||||| || || ||||| |||| ||| ||| ||||| Sbjct 17586 CAAGGATGCCTGCAACAAGAAGAGCAACCAGAAGAACCTGGGGACAATCCGGAGCTCCAA 17645 Query 112391 CCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGC 112450 || || || ||||| | || | | | | |||||||| ||||| || || ||||| Sbjct 17646 TCTGTGCACGGAAATTGTCGAGTACAGTGCCCCAGATGAGATCGCTGTCTGCAATCTCGC 17705 Query 112451 ATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACT 112510 || | ||||| || | | || |||| || | || ||| | || || Sbjct 17706 CTCTCTGGCTCTTCCAACCTTCGTCGATCAAGCCCGAGGTGAATATGACTTTGGCCGTCT 17765 Query 112511 CCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTA 112570 || |||||||| || ||||| |||| | |||| | || |||| || | || Sbjct 17766 TCATGAAGTTACCCAAGTCGTCACTCGAAACTTGAACAAGATCATCGATATCAACTACTA 17825 Query 112571 CCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCA 112630 ||| || || | || || | ||||||| || ||||||| ||||| || Sbjct 17826 CCCTGTGCCCGAAGCCAGGAAGAGCAACTTCCGACACCGACCTGTTGGTCTTGGTGTTCA 17885 Query 112631 AGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGG 112689 ||||| || |||| ||| || ||||| || | | || || || || || Sbjct 17886 GGGTCTTGCAGATGCCTTCCTTGCTTTG-CGTCTTCCTTTCGACTCTCCAGAGGCCCGTC 17944 Query 112690 AAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGT 112749 || |||| | || || || || || || || || ||||| ||| | || Sbjct 17945 AACTCAACATCCAAATTTTCGAAACCATCTACCATGCAGCTCTGACTGCGTCATGCGAAC 18004 Query 112750 TGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGC 112809 | || ||| | ||||| ||||| |||| |||||| || | |||||||| | | Sbjct 18005 TCGCCAAGGAACAAGGTCCCTATGAGACCTATGAGGGCAGCCCGGTCTCACAAGGTATCC 18064 Query 112810 TTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA---CTA--CGACTGGGACGCTCT 112864 |||| | |||||||| |||| || | | ||||| ||| || ||||| || | Sbjct 18065 TTCAGTATGATATGT-GGAATGTTACTC----CTTCAGATCTATGGGATTGGGATGCATT 18119 Query 112865 CAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAAC 112924 || | || | | ||| |||| ||| ||| | | || || ||||| || Sbjct 18120 GAAAGCTGAGATTGCTAAACATGGTGTTCGCAACTCTCTCCTTGTTGCCCCTATGCCTAC 18179 Query 112925 AGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACAT 112984 || |||||| | ||||||||||| || || |||||||| || || |||||| | ||||| Sbjct 18180 TGCATCCACCTCTCAAATCTTGGGCAACAACGAATGCTTCGAGCCATACACGTCCAACAT 18239 Query 112985 CTA 112987 ||| Sbjct 18240 CTA 18242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620730955062000