Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq116 123 3e-23 >seq116 Length=87516 Score = 123 bits (136), Expect = 3e-23 Identities = 176/248 (71%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 153768 CAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 153827 ||| | |||||| ||||| |||||||||| || || || || || |||||||| | Sbjct 31035 CAACGTTTTGGTGTTCCTTTGGGATATGGCGGACCCCACGCCGCCTTCTTTGCCTGCAAT 31094 Query 153828 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGT 153887 || ||| | || ||||||| ||||| | |||| || ||| ||| || ||| Sbjct 31095 GAAAAGCACAAACGAAAGATCCCTGGTCGTCTTGTCGGCGTGTCCAAGGATCGTCTCGGT 31154 Query 153888 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCA 153947 ||| ||| || |||| | |||||| | || ||||||||||| ||||| ||||| Sbjct 31155 AATCGAGCTCTTCGACTAGCCTTGCAGACTCGCGAACAGCATATCAGAAGAGAGAAAGCG 31214 Query 153948 ACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCA 154007 ||||| || ||||| || ||||| || || || || || ||| || ||| ||||| | Sbjct 31215 ACCAGCAATATCTGTACCGCTCAAGCGCTCCTTGCAAACATGAGTGCATTTTATGCCATA 31274 Query 154008 TATCATGG 154015 |||||||| Sbjct 31275 TATCATGG 31282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579202120764000