Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq883 159 8e-34 >seq883 Length=160511 Score = 159 bits (176), Expect = 8e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||||||| || | || |||||| ||| || ||||||||||| || | |||||| | Sbjct 38361 AGTCTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGT 38302 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| | ||||| ||||| ||||| | ||| ||||| || || ||||| || ||| Sbjct 38301 CCATCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCT 38242 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || || || || ||| ||||||||| ||||| ||||||||| ||| ||||| | ||| Sbjct 38241 TTATCCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTA 38182 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||||||| ||||| || || || || | ||||| Sbjct 38181 ATAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 38144 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || ||||| ||||| || || || || || ||| ||||||| || ||||| Sbjct 38124 ACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGCTGAGAGTTCGACCGTCTTCT 38065 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | || || || |||||||| | |||||||||||| || ||||| ||||| ||||||||| Sbjct 38064 AATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCGGAATTCCTTCCTTGTCTTGA 38005 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || || || || || || ||||| || ||||||||| || || | ||||| Sbjct 38004 ATCTTCGATTTTACATTGTCGATCGTGTCTGATGATTCCACTTCCAGTGTGATGGTCTTG 37945 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || || || | |||||| Sbjct 37944 CCAGTCAAGGTCTTGACAAAGATTTGCAT 37916 Score = 127 bits (140), Expect = 5e-24 Identities = 156/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||||||||| || |||||||| || ||||| || ||||| | || |||||| Sbjct 37896 ACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCTTCG 37837 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || || || || || ||||||||||| |||||||| ||||| ||||| || Sbjct 37836 AGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCCTGG 37777 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCT 195109 || || ||| || || || ||||| | | | || || || ||||| || | |||| Sbjct 37776 ATCTTGGACTTCACATTGTCGATGGTATCGCTGGAC--TCGACCTCAAGAGTGATGGTCT 37719 Query 195110 TTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || || | ||| || ||||| | |||||| Sbjct 37718 TGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37688 Score = 105 bits (116), Expect = 1e-17 Identities = 133/178 (75%), Gaps = 6/178 (3%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002 || || ||||| ||||| |||||||| |||| || | ||||| |||||||| || || Sbjct 37656 GTAGATTCTTTCTGAATGTTGTAATCACTCAAG-GTGCGGCCATCCTCGAGCTGTTTGCC 37598 Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062 ||||| || || |||||||| || |||||||||||||| ||||| ||||| || ||| Sbjct 37597 GGCGAAAATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGAATCTTGGACTT 37538 Query 195063 GACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCA 195118 || || || ||||| | | | || || || || ||||| | ||||| || |||| Sbjct 37537 TACATTGTCGATGGTATCGCTGGAC--TCGACCTCGAGGGTGATGGTCTTGCCGGTCA 37482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109460632531325