Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq883 82.4 5e-11 >seq883 Length=160511 Score = 82.4 bits (90), Expect = 5e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 ||||| ||||| || | ||||| || |||||||| || ||||| ||||| | ||| || Sbjct 38358 CTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGTCCA 38299 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || |||| || || || ||||| || | ||| || || || | || | ||||| || Sbjct 38298 TCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCTTTA 38239 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || ||||| |||||| | || | || | ||||| || | || || Sbjct 38238 TCCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTAATA 38179 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| || | ||||| |||||||||||||| Sbjct 38178 GTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 38144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324627764203800