Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq883 89.7 4e-12 >seq883 Length=160511 Score = 89.7 bits (98), Expect = 4e-12 Identities = 154/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 |||||| || || || ||||| || |||||| || ||||| ||| ||||| | Sbjct 37906 GAGACGAAGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTGAGAGTGCG 37847 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 ||||| ||||| || ||||||||||| || | ||| || || |||||||| ||||| Sbjct 37846 GCCGTCTTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTC 37787 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434 || || || || || || || || || ||||| || || | | || |||| Sbjct 37786 CTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTATCGCTG-GACTCGACCTCAAGAG 37728 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | | || || || |||||||| || ||||| ||||||||| Sbjct 37727 TGATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCATA 37687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029217995347750