Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq883 127 2e-24 >seq883 Length=160511 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 || || ||||| || || || || || |||||||| || | | ||| | |||| Sbjct 38355 AACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGTCCATCT 38296 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 ||||||||||| |||||||| ||||| ||||||||||| || ||||| || |||||||| Sbjct 38295 TCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCTTTATCC 38236 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 || || ||| || || | || | |||||| || | ||| ||||| | || | || Sbjct 38235 TGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTAATAGTC 38176 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || ||||| || || || ||||| ||||||||| Sbjct 38175 TTTCCGGTCAAGGTCTTGACAAAGATCTGCATG 38143 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||| || ||||||||||| || ||||| || || ||| | | | || || | |||| Sbjct 37890 TGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCTTCGAGTTGC 37831 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | ||| ||||| ||||| ||||| ||||| || || || || || Sbjct 37830 TTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCCTGGATCTTG 37771 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | || || | || || |||||||||| || |||||||| Sbjct 37770 GACTTCACATTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTA 37711 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||| || || || || ||||| Sbjct 37710 AGAGTCTTGACGAAGATTTGCAT 37688 Score = 82.4 bits (90), Expect = 6e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||| | |||||||||||| || || |||||||| | || | | |||| || Sbjct 37668 ACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACTCAAGGTGCGGCCATCCTCG 37609 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | || || || || || || | ||| |||||||| || ||||||||||| || || ||| Sbjct 37608 AGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGA 37549 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || |||||| | || | || || | || || || || |||| || ||| Sbjct 37548 ATCTTGGACTTTACATTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTG 37489 Query 101441 CCGGT 101445 ||||| Sbjct 37488 CCGGT 37484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396271276276575