Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq73 174 3e-38
seq377 86.0 1e-11
>seq73
Length=89549
Score = 174 bits (192), Expect = 3e-38
Identities = 701/1087 (64%), Gaps = 34/1087 (3%)
Strand=Plus/Minus
Query 213114 ACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAG 213173
|| |||||||| ||| |||| | ||| |||| || |||||||||| || |
Sbjct 18086 ACATTCCACATATCATACTGAAGGATACCTTGTGAGACCGGGCTGCCCTCATAGGTCTCA 18027
Query 213174 TAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTT 213233
||||| || || |||||||| || ||||| ||||| ||| || || | ||||||||||
Sbjct 18026 TAGGGACCTTGTTCCTTGGCGAGTTCGCATGACGCAGTCAGAGCTGCATGGTAGATGGTT 17967
Query 213234 TCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGT 213293
|| || || | ||||||| | ||||||||| || ||| || | ||
Sbjct 17966 TCGAAAATTTGGATGTTGAGTTGACGGGCCTCTGGAGAGTCGAAAGGAAGACGCAAAGCA 17907
Query 213294 TGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGAC 213353
|||| |||| || || ||||| || || | || | |||| ||||| | ||| |
Sbjct 17906 AGGAAGGCATCTGCAAGACCCTGAACACCAAGACCAACAGGTCGGTGTCGGAAGTTGCTC 17847
Query 213354 TTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTG 213413
|| | || || ||||| ||||| |||||||||||||| | ||| || |||
Sbjct 17846 TTCCTGGCTTCGGGCACAGGGTAGTAGTTGATATCGATGATCTTGTTCAAGTTTCGAGTG 17787
Query 213414 GCCACTTTGGTGA---CATG-----GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGT 213465
| |||| ||| | |||| ||||| | || | ||| ||| | | | |
Sbjct 17786 ACGACTTGGGTAACTTCATGAAGACGGCCA--AAGTCAT-ATT---CACCT--CGGGCTT 17735
Query 213466 CCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGT 213525
| || || || || || | ||| || ||||| || || | ||| | | |
Sbjct 17734 GATCGACGAAGGTTGGAAGAGCCAGAGAGGCGAGATTGCAGACAGCGATCTCATCTGGGG 17675
Query 213526 CTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGT 213585
| ||||||| | || || |||||||| ||| || ||||| || |||||||||| |
Sbjct 17674 CACTGTACTCGACAATTTCCGTGCACAGATTGGAGCTCCGGATTGTCCCCAGGTTCTTCT 17615
Query 213586 GGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCT 213645
|||| ||| |||| | ||||||||| ||||| || || | ||||||||| ||
Sbjct 17614 GGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATATAAGGAGTCCCGGTCTCGGTCT 17555
Query 213646 GGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGAC-AGCTCCG 213704
| | | || ||| ||| | | | |||||||| ||| ||||| | |||
Sbjct 17554 GTGCTTCTAGGATCGCATACCACAACTTCTGGGCCTTGA----CCGTCTGACGACCTCGT 17499
Query 213705 GGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGT 213764
| ||| |||||||| ||||| | | |||||| | ||| |||| | ||
Sbjct 17498 CCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCGCCATAGACATCAGCAAGG 17439
Query 213765 CCCGG-ACAGGATGCGGGACACATGAGGCTCCAGTCCCCG-TCATCTCTGACTC-TCTGC 213821
||||| | ||| ||||| | || ||||||| | || |||| ||| | ||| |
Sbjct 17438 CCCGGTGCCTCATG-AGGACAGAACAGAGTCCAGTCTTGGTTCTTCTC-GACACGTCT-C 17382
Query 213822 ATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACT 213881
||||| || ||||| ||| || || |||| ||| | || | ||| ||| |
Sbjct 17381 ATGAATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTT 17322
Query 213882 CCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAG 213941
|| ||| || | ||| | || | || |||| ||||||||||| ||||||| |||
Sbjct 17321 CCGTGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAG 17262
Query 213942 ATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTG 213998
||||||||||| || | || | ||||| ||||||||||| | ||| |||||
Sbjct 17261 ATGGCAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCACATAACGGGCAGTGTTGTTG 17202
Query 213999 AAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAG 214058
|||| || || | ||| | || || ||||| |||||||| || || ||||| ||
Sbjct 17201 AAGACACGAAGCATGGGAATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATAGGAA 17142
Query 214059 CCGGAGGCCCTCAGG--TTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCA 214116
|| | || | | | || | | ||| || || || || || |||||||||||
Sbjct 17141 CCAGTAGCACGAATGCAATGAGC--GTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCA 17084
Query 214117 TGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCA 214176
| || || | | | ||| || || || | |||||||| ||| | | || | ||
Sbjct 17083 TAGCACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCA 17024
Query 214177 AGAAGCA 214183
|||||||
Sbjct 17023 AGAAGCA 17017
>seq377
Length=202478
Score = 86.0 bits (94), Expect = 1e-11
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 48212 TTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAAC 48271
|| |||||||| || | ||||| ||||| |||||||| ||||| || || || | |||
Sbjct 90874 TTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAAATGCCTTCGACGGCAGAGAAT 90815
Query 48272 GCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCT 48331
||| ||| | | |||| || | ||||||||||||||| | ||||||||
Sbjct 90814 GCGACGAGGCGTTGGGCGAAGCTAGACTCCTTGTCTGAGATCCACTTCAAGGCCCAGTCA 90755
Query 48332 GCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366
|||||||| |||||| || || || || |||||
Sbjct 90754 GCCTTCTTGCGGATGCAGGGGATAGTATCAATGGC 90720
Score = 84.2 bits (92), Expect = 4e-11
Identities = 121/170 (71%), Gaps = 3/170 (2%)
Strand=Plus/Minus
Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550
|| ||||| | ||||| | || || || || || ||||| || || || ||||||||
Sbjct 90541 TGGACTTCAGCAGAGAACCGTTCGAGAAGGTTTTCGTTGACAATGCCGTCGGAAGCAGCG 90482
Query 48551 AAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT---CCAG 48607
|| || |||||||| || || ||| | || |||| | ||||| ||| ||||
Sbjct 90481 AAAAATGCAAGGACGTGGGAAATGAAGTATCGTTCGTCATCATTGAGACGATTGTGCCAG 90422
Query 48608 CCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657
| || | ||| ||| ||||||||||||||| | ||||||||||| ||
Sbjct 90421 TCGTGAAGGTCCTTGGACAGGTCCACTTCTTCAGCTGTCCAGAAGGATGC 90372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931515624864000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |