Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq994 140 2e-27
seq883 111 1e-18
>seq994
Length=146303
Score = 140 bits (154), Expect = 2e-27
Identities = 328/493 (67%), Gaps = 4/493 (1%)
Strand=Plus/Plus
Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451
|| || |||||||| ||||| || || |||| || || || | || | ||||| ||
Sbjct 81029 GAGATCATTGCCAACGACCAGGGCAACCGAACCACTCCCTCCTTCGTCGCCTTTACCGAC 81088
Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511
|| || | ||| ||||| || | || || | |||| ||| || || || ||
Sbjct 81089 ACCGAGCGTCTCATTGGTGACTCCGCGAAGAACCAAGTTGCCATGAACCCCCAGAACACC 81148
Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571
| ||||| || || | ||||| || || || || ||||| | || || |||||
Sbjct 81149 GTCTTTGACGCCAAGCGCTTGATCGGCCGGAAGTTCAATGATCCTGAAGTTCAGGCTGAT 81208
Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC--AA 474629
||| || | || || ||||| | | ||||| || || | |||| |
Sbjct 81209 ATGAAACACTTCCCATTCAAGGTTGTCGACAAGGGTGGCAAGCCCGTCGTTGAAGTGGAG 81268
Query 474630 TACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCA 474689
| || | || || | |||||||| | || ||| |||| || || ||||| || |||
Sbjct 81269 TTCAAG--GGCGAGATAAAACAATTCACTCCCGAAGAAATCTCATCCATGGTGTTGACCA 81326
Query 474690 AAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTG 474749
| |||| | ||||||| || ||||||||| || | | || || || ||||
Sbjct 81327 AGATGAGAGAAACCGCTGAATCGTATCTTGGAGGTACGGTCAACAACGCTGTCATCACTG 81386
Query 474750 TTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAG 474809
| || ||||| || || || ||||| |||||||| || || ||||| || ||||| |
Sbjct 81387 TCCCTGCATACTTCAACGACTCTCAGCGTCAAGCCACCAAGGATGCCGGTCTCATTGCCG 81446
Query 474810 GTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTG 474869
|||| ||||| | ||||| || || ||||| || || || || |||| || |||||||
Sbjct 81447 GTCTCAATGTCCTCCGTATCATCAACGAACCCACCGCGGCTGCCATTGCCTACGGTCTTG 81506
Query 474870 ATAAGAATTCTGA 474882
||||||| ||||
Sbjct 81507 ATAAGAAGGCTGA 81519
>seq883
Length=160511
Score = 111 bits (122), Expect = 1e-18
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| ||||| || || || ||||| || |||||| | || || ||| |||||
Sbjct 37909 ACGGAGACGAAGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTGAGAGT 37850
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | ||||| |||||||| || |||||||| ||||||||||| || |||||||| ||
Sbjct 37849 GCGGCCGTCTTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGAATACC 37790
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
||||||||| || ||||| || ||| || || ||||| || |||||
Sbjct 37789 TTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTATCGCTGGACTCGACCTCAAG 37730
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || || ||||| |||||||| ||||| |||||
Sbjct 37729 AGTGATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTG 37691
Score = 87.8 bits (96), Expect = 1e-11
Identities = 102/138 (74%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| || || || || | ||| | ||| |||||| || || |||||| | ||
Sbjct 37681 ACGGAGGCGAAGGACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACTCAAGGT 37622
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | ||| || || || || || || ||||| ||||||||||||||||||||||| ||
Sbjct 37621 GCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATGCC 37562
Query 480671 TTCCTTGTCTTGAATCTT 480688
||||||||| ||||||||
Sbjct 37561 TTCCTTGTCCTGAATCTT 37544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268115930093300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |