Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq883 118 2e-21
>seq883
Length=160511
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| ||||||| |||||| || || ||||| | || | ||| || || |||||||||
Sbjct 38145 ATGCCACCTCGCAATCGGAGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCG 38086
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| |||| | || |||||||||||||| || || || |||| ||||| || ||
Sbjct 38085 CTGAGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGC 38026
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| |||||||| || ||||| || || | ||||| ||| || || || || || ||
Sbjct 38025 GGAATTCCTTCCTTGTCTTGAATCTTCGATTTTACATTGTCGATCGTGTCTGATGATTCC 37966
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || || || || || || || | || || ||||| ||||||||
Sbjct 37965 ACTTCCAGTGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 37916
Score = 86.0 bits (94), Expect = 1e-11
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| |||||||| | | ||||| |||| |||||| |||| ||||| ||| ||
Sbjct 37695 ATTTGCATACCACCACGGAGGCGAAGGACCAAATGCAAGGTAGATTCTTTCTGAATGTTG 37636
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|| || || || | ||| || | ||||| ||||| ||||| | | ||||||
Sbjct 37635 TAATCACTCAAGGTGCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGACGTTGTTGA 37576
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|||||||| || ||||| || || || || |||| |||| ||| || ||||||
Sbjct 37575 TCAGGAGGAATGCCTTCCTTGTCCTGAATCTTGGACTTTACATTGTCGATGGTATCGCTG 37516
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGT 193336
||||| || || || || || || || || ||
Sbjct 37515 GACTCGACCTCGAGGGTGATGGTCTTGCCGGT 37484
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899637812622000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |