Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq73 120 9e-22 >seq73 Length=89549 Score = 120 bits (132), Expect = 9e-22 Identities = 480/752 (64%), Gaps = 13/752 (2%) Strand=Plus/Minus Query 155582 AAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAAT 155641 |||| | | ||| || ||||| || || || |||| | | | ||||| || ||||| Sbjct 17718 AAGAGCCAGAGAGGCGAGATTGCAGACAGCGATCTCATCTGGGGCACTGTACTCGACAAT 17659 Query 155642 CTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTT 155701 || |||||| || || ||| ||| || || | ||||||||||| || |||| Sbjct 17658 TTCCGTGCACAGATTGGAGCTCCGGATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTT 17599 Query 155702 ACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTT 155761 || ||||||||||| || || || || || || ||||| ||||||| || || ||| Sbjct 17598 GCAGGCATCCTTGTAAAGCATATAAGGAGTCCCGGTCTCGGTCTGTGCTTCTAGGATCGC 17539 Query 155762 TAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATT--TC 155819 ||| | | |||| || | || || || || |||||| | || Sbjct 17538 ATACCACAACTTCTGGGCCTTGACCGTCTGACGACCTCGTCCCTCTTTCTCATACTGTTC 17479 Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879 ||| | || | | | ||||| || || |||| || || || || || || Sbjct 17478 ATAGAGGGCATC--GAATTCCTCGCCATAGACATCAGCAAGGCCCGGTGCCTCATGAGGA 17421 Query 155880 CAAAACAGCGACCAAATTT---TATTACCGATTACACGCTCCATAAATACATCACTCGCC 155936 || ||||| | ||| || | || ||| |||| ||| |||| ||| | | Sbjct 17420 CAGAACAGAGTCCAGTCTTGGTTCTTCTCGA---CACGTCTCATGAATAGATCCGGAGTC 17364 Query 155937 CAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGC 155996 |||| ||||| || | ||| | || ||| || | ||||| ||||| | || Sbjct 17363 CAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCGTGGTTCTTTCTCAGG 17304 Query 155997 TCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC---A 156053 | | | || | ||| | || |||||||||||| || ||||| ||| | Sbjct 17303 TTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACCGGGA 17244 Query 156054 TTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGA 156113 | | ||||||||||| || ||||| || ||||| || |||||||||| ||||| ||| Sbjct 17243 CGCTTATTGCCACCCTGGTCCACATAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGA 17184 Query 156114 ATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTA 156173 || | ||||||||||||||| ||||| ||| ||||| ||||||| | |||| | Sbjct 17183 ATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATAGGAACCAGTAGCACGAATGCAA 17124 Query 156174 TGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTA 156233 ||| | || |||||||| || | || || || ||| || ||| | ||| Sbjct 17123 TGAGCGTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGCACAAGTCTTGAGAGTG 17064 Query 156234 TTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGA 156293 | | |||| || ||||| || |||| ||| | | |||| || |||||| Sbjct 17063 TCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGACAATTGA 17004 Query 156294 GGTCGTGGTGTTCCAGCGTTGAATAGTGTAGG 156325 ||| | || || || || ||||| || || || Sbjct 17003 GGTTGCGGAGTGCCGGCATTGAACAGAGTTGG 16972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471789784947075