Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1279 129 7e-24 seq73 93.3 5e-13 seq377 89.7 6e-12 >seq1279 Length=128219 Score = 129 bits (142), Expect = 7e-24 Identities = 95/111 (86%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || ||||||||| | || || ||| ||||||||||| | || |||||| | || |||||| Sbjct 14258 GCTGCCAACTACTTGGATATTAAGGCTCTGCTCGATGTCGGTTGCAAGACCGTCGCCAAC 14199 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||||||||| || |||||||||||||||||||| |||||| || Sbjct 14198 ATGATCAAGGGCAAGTCCCCAGAGGAGATCCGCAAGACCTTCAACATCCAG 14148 >seq73 Length=89549 Score = 93.3 bits (102), Expect = 5e-13 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 1628464 GTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTG 1628523 ||||| ||||| ||||| | ||| || || || ||| ||||| |||||||||||| | Sbjct 17366 GTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCGTGGTTCTTTCTC 17307 Query 1628524 AGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCC 1628582 |||| ||||| |||| | || |||||||| |||||||| ||| ||||||||| || Sbjct 17306 AGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACC 17248 >seq377 Length=202478 Score = 89.7 bits (98), Expect = 6e-12 Identities = 160/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758 ||| || || || ||| |||||| ||||| ||||| ||| | | ||||| ||||| Sbjct 91290 GTAATCACCGACACGCTTCTCGAAGAAGTTTGTCTTTCCCGCCAATGAGATGTTGTCCAT 91231 Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818 | ||| || || | | ||||||| ||| | | |||||| | ||| || || Sbjct 91230 AAAGCTGAAAGGATTCTGGGCATTGTAGTACTTCTTGTTTCCGAGGGCAAGGAGAAGACG 91171 Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878 |||||| || ||||| || || || ||| || |||||||||||| | || || || Sbjct 91170 GTCGGCAACGAACTCAATATATTGTTGCATCAGTTTGGCGTTCATGCCAAGCAGAGCGAC 91111 Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGAT 868932 |||| | || ||| ||| || |||||||| | || |||||| |||||| Sbjct 91110 AGGCAAAGCATCTGTCAAAAATTCCTTCTCGATGACAACAGCCTCGGTGATGAT 91057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107018154592575