Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq73 141 8e-29 seq883 113 4e-20 >seq73 Length=89549 Score = 141 bits (156), Expect = 8e-29 Identities = 550/853 (64%), Gaps = 25/853 (3%) Strand=Plus/Minus Query 139084 GAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACAC 139143 ||||| | ||||| || || | || || ||| | ||||| ||||||||||| | ||| Sbjct 17708 GAGGCGAGATTGCAGACAGCGATCTCATCTGGGGCACTGTACTCGACAATTTCCGTGCAC 17649 Query 139144 AAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCT 139203 | ||| | | ||| || || | || | || ||||| || ||| || ||||| Sbjct 17648 AGATTGGAGCTCCGGATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCATCC 17589 Query 139204 TTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAG 139263 |||||||||||||| || || || || || |||| |||| || | |||| Sbjct 17588 TTGTAAAGCATATAAGGAGTCCCGGTCTCGGTCTGTGCTTCTAGGATCGCATACCACAAC 17529 Query 139264 TCCCTAGCTTGTA---TTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGT 139320 | | || | | | ||||| || | || | || ||| |||| ||| ||||| Sbjct 17528 TTCTGGGCCTTGACCGTCTGACG-ACCTC--GTCCCTCTTTCTCATACTGTTCATAGAGG 17472 Query 139321 TCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGC 139380 | |||||| || || ||| | |||| ||| | | || | |||||| | || Sbjct 17471 GCATCGAATTCCTCGCCATAGACATCAGCAAGGCCCGGTGCCTCATGAGGACAGAACAGA 17412 Query 139381 GACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAAC 139440 | ||| | |||| || ||| || |||||||| ||||||||| |||| | || | Sbjct 17411 GTCCAGTCTTGGTTCTTCTCGACACGTCTCATGAATAGATCCGGAGTCCAAAGTGCATAA 17352 Query 139441 AGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCA 139500 | ||| || || || |||||| || ||| | ||| ||| || |||| Sbjct 17351 AACAAGTCACGGGCGCGAACCTCTTCCTTTCCGTGGTTCTTTCTCAGGTTCAGCCAATCG 17292 Query 139501 AAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCA 139557 || || || ||||||||||| |||||||||||||| | || || || |||||| Sbjct 17291 AAGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACCGGGACGCTTATTGCCA 17232 Query 139558 CCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTC 139617 || || || || | || ||| || ||||| || || | ||| || ||||| | Sbjct 17231 CCCTGGTCCACATAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAGACCATTG 17172 Query 139618 GCTGTTCCGTTGGTGCTACGG----ATGGGA--CTGTTGCGAGCTCGGACGTCATGTACA 139671 | || |||||||| | ||| || ||| | || ||| || | | ||| | Sbjct 17171 GAAGTGCCGTTGGTCC--CGGCAATATAGGAACCAGT----AGCACGAATGCAATGAGCG 17118 Query 139672 TTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTA 139730 |||| ||| || ||||| || ||||| || | | | ||| || | | || ||||| Sbjct 17117 TTGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGCACAAGTCTTG-AGAGTGTCGTA 17059 Query 139731 TATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAG 139790 || || |||||||| || | ||| ||||| |||||||| || | ||| ||| | Sbjct 17058 AATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGACAATTGAGGTTG 16999 Query 139791 TTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA-CATTTGTTTCGACATCA 139849 |||||||| |||||||| ||| ||||| ||||| || || | ||||| | Sbjct 16998 CGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGTGAAGCACTT-CTGGGACATGA 16940 Query 139850 ATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCA 139909 | ||| || || || || || | || || ||| ||||| || || | || |||| Sbjct 16939 GGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATGGATGCCAACTGCCACACGCA 16880 Query 139910 TCAGCATATGTTG 139922 | ||||| ||||| Sbjct 16879 TGAGCATGTGTTG 16867 >seq883 Length=160511 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | ||||| || ||||||||| | ||||| ||| | | Sbjct 38144 ATGCAGATCTTTGTCAAGACCTTGACCGGAAAGACTATTACGTTGGAAGTTGAATCTTCG 38203 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||| || ||||| || || || || |||||| Sbjct 38204 GACACTATTGACAACGTCAAGTCAAAGATCCAGGATAAAGAGGGTATTCCACCGGATCAA 38263 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||| || || || |||| ||| | | | || || || || Sbjct 38264 CAGCGATTGATCTTTGCAGGCAAGCAATTGGAAGATGGACGCACTCTTTCTGACTACAAT 38323 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||| || || || ||||||||| || | || || || Sbjct 38324 ATTCAGAAGGAGAGCACTCTGCATTTGGTGTTGAGACTTCGTGGTGG 38370 Score = 104 bits (114), Expect = 2e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 ||||| || || || || ||||| || || ||| ||| || | || | ||||| Sbjct 37484 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAATGTAAAGTCC 37543 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| || ||||| ||||| || ||||| |||||||||||| | || || ||||| ||| Sbjct 37544 AAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAACAACGTCTCATTTTCGCCGGCAAA 37603 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 ||||| |||||| | | | || ||||| |||||||| || ||||| || | || Sbjct 37604 CAGCTCGAGGATGGCCGCACCTTGAGTGATTACAACATTCAGAAAGAATCTACCTTGCAT 37663 Query 24908 TTGGT 24912 ||||| Sbjct 37664 TTGGT 37668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449889305013000