Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq73 141 8e-29
seq883 113 4e-20
>seq73
Length=89549
Score = 141 bits (156), Expect = 8e-29
Identities = 550/853 (64%), Gaps = 25/853 (3%)
Strand=Plus/Minus
Query 139084 GAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACAC 139143
||||| | ||||| || || | || || ||| | ||||| ||||||||||| | |||
Sbjct 17708 GAGGCGAGATTGCAGACAGCGATCTCATCTGGGGCACTGTACTCGACAATTTCCGTGCAC 17649
Query 139144 AAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCT 139203
| ||| | | ||| || || | || | || ||||| || ||| || |||||
Sbjct 17648 AGATTGGAGCTCCGGATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCATCC 17589
Query 139204 TTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAG 139263
|||||||||||||| || || || || || |||| |||| || | ||||
Sbjct 17588 TTGTAAAGCATATAAGGAGTCCCGGTCTCGGTCTGTGCTTCTAGGATCGCATACCACAAC 17529
Query 139264 TCCCTAGCTTGTA---TTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGT 139320
| | || | | | ||||| || | || | || ||| |||| ||| |||||
Sbjct 17528 TTCTGGGCCTTGACCGTCTGACG-ACCTC--GTCCCTCTTTCTCATACTGTTCATAGAGG 17472
Query 139321 TCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGC 139380
| |||||| || || ||| | |||| ||| | | || | |||||| | ||
Sbjct 17471 GCATCGAATTCCTCGCCATAGACATCAGCAAGGCCCGGTGCCTCATGAGGACAGAACAGA 17412
Query 139381 GACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAAC 139440
| ||| | |||| || ||| || |||||||| ||||||||| |||| | || |
Sbjct 17411 GTCCAGTCTTGGTTCTTCTCGACACGTCTCATGAATAGATCCGGAGTCCAAAGTGCATAA 17352
Query 139441 AGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCA 139500
| ||| || || || |||||| || ||| | ||| ||| || ||||
Sbjct 17351 AACAAGTCACGGGCGCGAACCTCTTCCTTTCCGTGGTTCTTTCTCAGGTTCAGCCAATCG 17292
Query 139501 AAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCA 139557
|| || || ||||||||||| |||||||||||||| | || || || ||||||
Sbjct 17291 AAGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACCGGGACGCTTATTGCCA 17232
Query 139558 CCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTC 139617
|| || || || | || ||| || ||||| || || | ||| || ||||| |
Sbjct 17231 CCCTGGTCCACATAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAGACCATTG 17172
Query 139618 GCTGTTCCGTTGGTGCTACGG----ATGGGA--CTGTTGCGAGCTCGGACGTCATGTACA 139671
| || |||||||| | ||| || ||| | || ||| || | | ||| |
Sbjct 17171 GAAGTGCCGTTGGTCC--CGGCAATATAGGAACCAGT----AGCACGAATGCAATGAGCG 17118
Query 139672 TTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTA 139730
|||| ||| || ||||| || ||||| || | | | ||| || | | || |||||
Sbjct 17117 TTGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGCACAAGTCTTG-AGAGTGTCGTA 17059
Query 139731 TATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAG 139790
|| || |||||||| || | ||| ||||| |||||||| || | ||| ||| |
Sbjct 17058 AATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGACAATTGAGGTTG 16999
Query 139791 TTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA-CATTTGTTTCGACATCA 139849
|||||||| |||||||| ||| ||||| ||||| || || | ||||| |
Sbjct 16998 CGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGTGAAGCACTT-CTGGGACATGA 16940
Query 139850 ATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCA 139909
| ||| || || || || || | || || ||| ||||| || || | || ||||
Sbjct 16939 GGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATGGATGCCAACTGCCACACGCA 16880
Query 139910 TCAGCATATGTTG 139922
| ||||| |||||
Sbjct 16879 TGAGCATGTGTTG 16867
>seq883
Length=160511
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || | ||||| || ||||||||| | ||||| ||| | |
Sbjct 38144 ATGCAGATCTTTGTCAAGACCTTGACCGGAAAGACTATTACGTTGGAAGTTGAATCTTCG 38203
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||||||| || ||||| || || || || ||||||
Sbjct 38204 GACACTATTGACAACGTCAAGTCAAAGATCCAGGATAAAGAGGGTATTCCACCGGATCAA 38263
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || ||||||||||| || || || |||| ||| | | | || || || ||
Sbjct 38264 CAGCGATTGATCTTTGCAGGCAAGCAATTGGAAGATGGACGCACTCTTTCTGACTACAAT 38323
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| ||||| || || || ||||||||| || | || || ||
Sbjct 38324 ATTCAGAAGGAGAGCACTCTGCATTTGGTGTTGAGACTTCGTGGTGG 38370
Score = 104 bits (114), Expect = 2e-17
Identities = 134/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787
||||| || || || || ||||| || || ||| ||| || | || | |||||
Sbjct 37484 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAATGTAAAGTCC 37543
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
||||| || ||||| ||||| || ||||| |||||||||||| | || || ||||| |||
Sbjct 37544 AAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAACAACGTCTCATTTTCGCCGGCAAA 37603
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
||||| |||||| | | | || ||||| |||||||| || ||||| || | ||
Sbjct 37604 CAGCTCGAGGATGGCCGCACCTTGAGTGATTACAACATTCAGAAAGAATCTACCTTGCAT 37663
Query 24908 TTGGT 24912
|||||
Sbjct 37664 TTGGT 37668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449889305013000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |