Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1279 114 2e-19 seq73 113 7e-19 seq377 105 1e-16 seq1160 89.7 8e-12 >seq1279 Length=128219 Score = 114 bits (126), Expect = 2e-19 Identities = 92/111 (83%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || ||||||||| | || || ||| | || |||||| | || ||||||||||| |||||| Sbjct 14258 GCTGCCAACTACTTGGATATTAAGGCTCTGCTCGATGTCGGTTGCAAGACCGTCGCCAAC 14199 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757 | |||||||||||||| || ||||| |||||||||||||| |||||| || Sbjct 14198 ATGATCAAGGGCAAGTCCCCAGAGGAGATCCGCAAGACCTTCAACATCCAG 14148 >seq73 Length=89549 Score = 113 bits (124), Expect = 7e-19 Identities = 205/300 (68%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| ||||| || || |||| ||| ||||| || |||||||| | || || ||||| Sbjct 17229 CTGGTCCACATAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAGACCATTGGA 17170 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||||||| || || | |||| || | || || | || ||| | ||| Sbjct 17169 AGTGCCGTTGGTCCCGGCAATATAGGAACCAGTAGCACGAATGCAATGAGCGTTGAGGCC 17110 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || ||||| || | ||||||||| | || || | || || || ||||| || ||||| Sbjct 17109 AATACCGCCAGCAGTCTTGGAGATCATAGCACAAGTCTTGAGAGTGTCGTAAATTCCCTC 17050 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| | |||||||| | || ||||| || || ||| || ||| ||||| Sbjct 17049 AATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGACAATTGAGGTTGCGGAGTGCC 16990 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839 ||||||||| || || || | || ||| | ||| ||||||||| | |||||| Sbjct 16989 GGCATTGAACAGAGTTGGAGAGGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGT 16930 Score = 89.7 bits (98), Expect = 8e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 2071876 GTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTC 2071935 ||||| || | ||||| | || || || || ||| ||||| |||||||||||| || Sbjct 17366 GTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCGTGGTTCTTTCTC 17307 Query 2071936 AGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCC 2071994 |||| ||||| |||| || || |||||||| |||||||| ||| ||||||||| || Sbjct 17306 AGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACC 17248 >seq377 Length=202478 Score = 105 bits (116), Expect = 1e-16 Identities = 180/259 (69%), Gaps = 9/259 (3%) Strand=Plus/Minus Query 794399 TCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 794458 |||| ||||| ||||||| ||| ||| ||||| || ||||| |||||||| | | Sbjct 90876 TCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAAATGCCTTCGACGGCAGAGA 90817 Query 794459 AGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTT---GATCCACTTCATCG 794515 | ||||||| || | ||| || | || | || |||| ||||||||||| | Sbjct 90816 ATGCGACGAGGCGTTGGGCGAAGCT----AGAC--TCCTTGTCTGAGATCCACTTCAAGG 90763 Query 794516 CCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCT 794575 |||| || ||||| || | | |||| | || || |||||| |||||| | | || Sbjct 90762 CCCAGTCAGCCTTCTTGCGGATGCAGGGGATAGTATCAATGGCGTCAAAGAGATAGGACT 90703 Query 794576 TCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGT 794635 | | || || |||| ||||||||||||||| | ||| |||||||||| |||| Sbjct 90702 TTTGTTTGGGATCTTTGATGTAGGTGTCGATGAGCAAGCTGTACATCTCTGAGTGAATGT 90643 Query 794636 TTTCGATGGCGATCTGGAA 794654 ||||||| || |||||| Sbjct 90642 TTTCGATCATGACCTGGAA 90624 >seq1160 Length=134009 Score = 89.7 bits (98), Expect = 8e-12 Identities = 100/130 (77%), Gaps = 8/130 (6%) Strand=Plus/Minus Query 2233090 GGTCGCCTTTCCCACCGAGACCGTCTATGGCCTCGGCGCCGACGCGGCGTCAGACGAGGC 2233149 ||| || |||||||| |||||||||||||| || || || |||||| | || | ||| | Sbjct 65840 GGTTGCATTTCCCACGGAGACCGTCTATGGTCTAGGTGCAGACGCGAC--CA-ATGAGCC 65784 Query 2233150 CGTA----CAGCGCATCTTTGACGCCAAGGGCCGACCGTCCAACAACCCGATCATCGTGC 2233205 | | ||| ||||||||| |||||| ||||||||| |||||||| ||||||| | Sbjct 65783 TGCAATCTCAG-GCATCTTTGCCGCCAAAGGCCGACCGAGTGACAACCCGCTCATCGTCC 65725 Query 2233206 ACGTGGCCTC 2233215 |||| || || Sbjct 65724 ACGTTGCATC 65715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916089497522525