Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq256 118 7e-22
seq883 102 5e-17
seq1350 84.2 1e-11
>seq256
Length=205955
Score = 118 bits (130), Expect = 7e-22
Identities = 107/135 (79%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809
|||||||| || | |||||||||||| | || ||||||||||||||| ||||| ||
Sbjct 110823 TCCTCCCCGCAGGCGCAGGACCAGGTGCAACGTTGACTCCTTCTGAATGTTGTAGTCGGA 110764
Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869
|| |||| |||| || |||||||| |||||||||||||| ||||||||||| | ||
Sbjct 110763 CAGAGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCAGGAGG 110704
Query 34870 CACCCCCTCCTTGTC 34884
| || ||||||||
Sbjct 110703 GATGCCTTCCTTGTC 110689
>seq883
Length=160511
Score = 102 bits (112), Expect = 5e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
|||| |||| || | ||||||||||||||||| || ||||| || || |||| ||
Sbjct 38358 CTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGTCCA 38299
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| |||| |||||| || || ||||||| ||| || || || | || | ||||| ||
Sbjct 38298 TCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCTTTA 38239
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || ||| |||||| | || | || | || || || | || ||
Sbjct 38238 TCCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTAATA 38179
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|||||||| || | |||||| |||||||||||||||
Sbjct 38178 GTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCATG 38143
Score = 86.0 bits (94), Expect = 4e-12
Identities = 150/216 (69%), Gaps = 8/216 (4%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||||| || || || || ||||| ||||| || |||| | ||
Sbjct 37899 AGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCT 37840
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||| ||||| || || || ||||| ||||| | || | || ||||||||
Sbjct 37839 TCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCC 37780
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || || || || | ||||| || ||| |||||| |||| || ||
Sbjct 37779 TGGATCTTGGACTTCAC--AT--TGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGAT 37724
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| || || || ||||| || ||||| |||||
Sbjct 37723 GGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37688
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||||||||| || | || | || || | ||| ||||| |||||
Sbjct 38107 CTCCTTCTGGATGTTATAGTCGCTGAGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAA 38048
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| |||||| ||||| |||| | || |||||||| | || || ||| ||
Sbjct 38047 GATCAATCGTTGTTGGTCCGGCGGAATTCCTTCCTTGTCTTGAATCTTCGATTTTACATT 37988
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| |||| || | || || || | || |||||||| || || | |||||| ||
Sbjct 37987 GTCGATCGTGTCTGATGATTCCACTTCCAGTGTGATGGTCTTGCCAGTCAAGGTCTTGAC 37928
Query 34966 AAAGATCTGCAT 34977
|||||| |||||
Sbjct 37927 AAAGATTTGCAT 37916
>seq1350
Length=234104
Score = 84.2 bits (92), Expect = 1e-11
Identities = 135/192 (70%), Gaps = 8/192 (4%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
|||| || ||||| || || || | || |||| || |||||||| ||||||||||
Sbjct 96582 CCTTTTGGATGTTGTAATCACTCAGTGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 96523
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
||| || || ||||| | || | || ||||| || | || || ||||||
Sbjct 96522 TCAAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTATCTTGGATCTTGGACTTGACGT--- 96466
Query 34908 CTATCGATTC-ATTGGCC---TCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| |||||| || || | ||||| |||| ||| |||||||| ||||||||||||||
Sbjct 96465 -TGTCGATTGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTG 96407
Query 34964 ACAAAGATCTGC 34975
|| ||| | |||
Sbjct 96406 ACGAAGCTGTGC 96395
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325686945163025
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |