Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq256 118 7e-22 seq883 102 5e-17 seq1350 84.2 1e-11 >seq256 Length=205955 Score = 118 bits (130), Expect = 7e-22 Identities = 107/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 |||||||| || | |||||||||||| | || ||||||||||||||| ||||| || Sbjct 110823 TCCTCCCCGCAGGCGCAGGACCAGGTGCAACGTTGACTCCTTCTGAATGTTGTAGTCGGA 110764 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 || |||| |||| || |||||||| |||||||||||||| ||||||||||| | || Sbjct 110763 CAGAGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCAGGAGG 110704 Query 34870 CACCCCCTCCTTGTC 34884 | || |||||||| Sbjct 110703 GATGCCTTCCTTGTC 110689 >seq883 Length=160511 Score = 102 bits (112), Expect = 5e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 |||| |||| || | ||||||||||||||||| || ||||| || || |||| || Sbjct 38358 CTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGTCCA 38299 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || |||| |||||| || || ||||||| ||| || || || | || | ||||| || Sbjct 38298 TCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCTTTA 38239 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || ||| |||||| | || | || | || || || | || || Sbjct 38238 TCCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTAATA 38179 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||||| || | |||||| ||||||||||||||| Sbjct 38178 GTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCATG 38143 Score = 86.0 bits (94), Expect = 4e-12 Identities = 150/216 (69%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||||| || || || || ||||| ||||| || |||| | || Sbjct 37899 AGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCT 37840 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| ||||| || || || ||||| ||||| | || | || |||||||| Sbjct 37839 TCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCC 37780 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || | ||||| || ||| |||||| |||| || || Sbjct 37779 TGGATCTTGGACTTCAC--AT--TGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGAT 37724 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| || || || ||||| || ||||| ||||| Sbjct 37723 GGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37688 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||||||||| || | || | || || | ||| ||||| ||||| Sbjct 38107 CTCCTTCTGGATGTTATAGTCGCTGAGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAA 38048 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| |||||| ||||| |||| | || |||||||| | || || ||| || Sbjct 38047 GATCAATCGTTGTTGGTCCGGCGGAATTCCTTCCTTGTCTTGAATCTTCGATTTTACATT 37988 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || | || || || | || |||||||| || || | |||||| || Sbjct 37987 GTCGATCGTGTCTGATGATTCCACTTCCAGTGTGATGGTCTTGCCAGTCAAGGTCTTGAC 37928 Query 34966 AAAGATCTGCAT 34977 |||||| ||||| Sbjct 37927 AAAGATTTGCAT 37916 >seq1350 Length=234104 Score = 84.2 bits (92), Expect = 1e-11 Identities = 135/192 (70%), Gaps = 8/192 (4%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 |||| || ||||| || || || | || |||| || |||||||| |||||||||| Sbjct 96582 CCTTTTGGATGTTGTAATCACTCAGTGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 96523 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| || || ||||| | || | || ||||| || | || || |||||| Sbjct 96522 TCAAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTATCTTGGATCTTGGACTTGACGT--- 96466 Query 34908 CTATCGATTC-ATTGGCC---TCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | |||||| || || | ||||| |||| ||| |||||||| |||||||||||||| Sbjct 96465 -TGTCGATTGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTG 96407 Query 34964 ACAAAGATCTGC 34975 || ||| | ||| Sbjct 96406 ACGAAGCTGTGC 96395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325686945163025