Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq994 118 8e-21
seq956 95.1 9e-14
seq789 95.1 9e-14
>seq994
Length=146303
Score = 118 bits (130), Expect = 8e-21
Identities = 414/639 (65%), Gaps = 8/639 (1%)
Strand=Plus/Minus
Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241
|| || || || ||||| || ||||| |||| | ||||| || | || | | |||
Sbjct 81663 ACGAGGCGGTTGTCAAAGTCCTCACCACCCAGGTGAGTATCACCAGCAGTGGACTTGACT 81604
Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301
| ||| | || ||||||| | ||| || | ||||| || |||||||| | |||
Sbjct 81603 TCGAAGATACCCTCTTCAATGGTCAAGAGCGACACATCGAAAGTACCACCACCAAGATCG 81544
Query 282302 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 282361
|| || | || || || || || ||||||||||| || |||| |||||
Sbjct 81543 AAGATCAAGACGTTGCGCTCACCCTCAGCCTTCTTATCAAGACCGTAGGCAATGGCAGCC 81484
Query 282362 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 282421
|| || ||||| || || || | | ||||| ||||| ||||| || ||||| ||
Sbjct 81483 GCGGTGGGTTCGTTGATGATACGGAGGACATTGAGACCGGCAATGAGACCGGCATCCTTG 81424
Query 282422 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT-AC 282480
|||||||| | || || ||||| || |||||||| ||||| || || || | |||| ||
Sbjct 81423 GTGGCTTGACGCTGAGAGTCGTTGAAGTATGCAGGGACAGTGATGACAGCGT-TGTTGAC 81365
Query 282481 TTCTTTTCCAATATAAGCGCTT--GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAA 282538
||||| ||| || || || |||| | |||| || | || | ||| |||||
Sbjct 81364 CGTACCTCCAAGATA--CGATTCAGCGGTTTCTCTCATCTTGGTCAACACCATGGATGAG 81307
Query 282539 ATTTGTTCTGGAGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTT 282597
|||| ||| |||| |||| || || |||| | ||||||| || ||
Sbjct 81306 ATTTCTTCGGGAGTGAATTGTTTTATCTCGCCCTTGA-ACTCCACTTCAACGACGGGCTT 81248
Query 282598 ATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTC 282657
||| | | ||| || ||||| | | ||||||||| | ||||| | ||
Sbjct 81247 GCCACCCTTGTCGACAACCTTGAATGGGAAGTGTTTCATATCAGCCTGAACTTCAGGATC 81188
Query 282658 ATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGC 282717
||| || | | || || || || || || ||||| | || || || || | ||
Sbjct 81187 ATTGAACTTCCGGCCGATCAAGCGCTTGGCGTCAAAGACGGTGTTCTGGGGGTTCATGGC 81128
Query 282718 AGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGA 282777
| |||| | || || | || ||||| ||| | || || || ||||| | || | ||
Sbjct 81127 AACTTGGTTCTTCGCGGAGTCACCAATGAGACGCTCGGTGTCGGTAAAGGCGACGAAGGA 81068
Query 282778 TGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTC 282816
||||| || || || || || || || ||||| || ||
Sbjct 81067 GGGAGTGGTTCGGTTGCCCTGGTCGTTGGCAATGATCTC 81029
>seq956
Length=21473
Score = 95.1 bits (104), Expect = 9e-14
Identities = 191/283 (67%), Gaps = 3/283 (1%)
Strand=Plus/Plus
Query 282192 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 282251
|||| ||||| | ||||||| | |||| |||| ||||| | || ||||| |
Sbjct 18416 TATCGAAATCCTGTCCTCCCAGGTGGGTATCACCTGCGGTAGCCTTGACAGTGAAAACAC 18475
Query 282252 CATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 282311
|| ||| || ||| || | ||||| || |||||||| | |||| | || || |
Sbjct 18476 CACCTTGAATGTTCAAGAGGGAGACATCGAAAGTGCCACCACCGAGATCATAGATCAGAA 18535
Query 282312 CATTCATTTCTTTGTCTTGGTTTTTATCA---AGACCATACGCAAAAGCAGCAGCAGTTG 282368
| || ||| ||||| || | | ||||| || |||| |||||| || || |
Sbjct 18536 CGTTTCGTTCCTTGTCAGACTTGCCAGAACCGAGACCGTAGGCAATAGCAGCCGCGGTAG 18595
Query 282369 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 282428
| || || || || | | ||| || ||||| ||||| || ||||| || |||||||
Sbjct 18596 GCTCGTTGATGATGCGGAGAACGTTGAGACCGGCAATGGCACCGGCATCCTTGGTGGCTT 18655
Query 282429 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471
||||||| ||||| || || || |||||||| ||||| ||
Sbjct 18656 GTCTTTGATTGTCGTTGAAGTAGGCGGGAACAGTGATAACAGC 18698
>seq789
Length=50723
Score = 95.1 bits (104), Expect = 9e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192
||||| || ||||| | ||||| |||||||||||| ||||| |||| ||| | || |||
Sbjct 30983 GAATTCTTTTTCCACGCCATGGCCGGTCGTGAAGGTCTTATTGATACCGCTGTCAAGACT 31042
Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGA 435239
|| || |||||||| |||||| | |||||||||| ||||||||
Sbjct 31043 GCCGAGACTGGTTACATTCAACGCCGACTTGTCAAGGCTCTTGAAGA 31089
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740557983733350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |