Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq994 118 8e-21 seq956 95.1 9e-14 seq789 95.1 9e-14 >seq994 Length=146303 Score = 118 bits (130), Expect = 8e-21 Identities = 414/639 (65%), Gaps = 8/639 (1%) Strand=Plus/Minus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 || || || || ||||| || ||||| |||| | ||||| || | || | | ||| Sbjct 81663 ACGAGGCGGTTGTCAAAGTCCTCACCACCCAGGTGAGTATCACCAGCAGTGGACTTGACT 81604 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | ||| | || ||||||| | ||| || | ||||| || |||||||| | ||| Sbjct 81603 TCGAAGATACCCTCTTCAATGGTCAAGAGCGACACATCGAAAGTACCACCACCAAGATCG 81544 Query 282302 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 282361 || || | || || || || || ||||||||||| || |||| ||||| Sbjct 81543 AAGATCAAGACGTTGCGCTCACCCTCAGCCTTCTTATCAAGACCGTAGGCAATGGCAGCC 81484 Query 282362 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 282421 || || ||||| || || || | | ||||| ||||| ||||| || ||||| || Sbjct 81483 GCGGTGGGTTCGTTGATGATACGGAGGACATTGAGACCGGCAATGAGACCGGCATCCTTG 81424 Query 282422 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT-AC 282480 |||||||| | || || ||||| || |||||||| ||||| || || || | |||| || Sbjct 81423 GTGGCTTGACGCTGAGAGTCGTTGAAGTATGCAGGGACAGTGATGACAGCGT-TGTTGAC 81365 Query 282481 TTCTTTTCCAATATAAGCGCTT--GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAA 282538 ||||| ||| || || || |||| | |||| || | || | ||| ||||| Sbjct 81364 CGTACCTCCAAGATA--CGATTCAGCGGTTTCTCTCATCTTGGTCAACACCATGGATGAG 81307 Query 282539 ATTTGTTCTGGAGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTT 282597 |||| ||| |||| |||| || || |||| | ||||||| || || Sbjct 81306 ATTTCTTCGGGAGTGAATTGTTTTATCTCGCCCTTGA-ACTCCACTTCAACGACGGGCTT 81248 Query 282598 ATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTC 282657 ||| | | ||| || ||||| | | ||||||||| | ||||| | || Sbjct 81247 GCCACCCTTGTCGACAACCTTGAATGGGAAGTGTTTCATATCAGCCTGAACTTCAGGATC 81188 Query 282658 ATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGC 282717 ||| || | | || || || || || || ||||| | || || || || | || Sbjct 81187 ATTGAACTTCCGGCCGATCAAGCGCTTGGCGTCAAAGACGGTGTTCTGGGGGTTCATGGC 81128 Query 282718 AGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGA 282777 | |||| | || || | || ||||| ||| | || || || ||||| | || | || Sbjct 81127 AACTTGGTTCTTCGCGGAGTCACCAATGAGACGCTCGGTGTCGGTAAAGGCGACGAAGGA 81068 Query 282778 TGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTC 282816 ||||| || || || || || || || ||||| || || Sbjct 81067 GGGAGTGGTTCGGTTGCCCTGGTCGTTGGCAATGATCTC 81029 >seq956 Length=21473 Score = 95.1 bits (104), Expect = 9e-14 Identities = 191/283 (67%), Gaps = 3/283 (1%) Strand=Plus/Plus Query 282192 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 282251 |||| ||||| | ||||||| | |||| |||| ||||| | || ||||| | Sbjct 18416 TATCGAAATCCTGTCCTCCCAGGTGGGTATCACCTGCGGTAGCCTTGACAGTGAAAACAC 18475 Query 282252 CATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 282311 || ||| || ||| || | ||||| || |||||||| | |||| | || || | Sbjct 18476 CACCTTGAATGTTCAAGAGGGAGACATCGAAAGTGCCACCACCGAGATCATAGATCAGAA 18535 Query 282312 CATTCATTTCTTTGTCTTGGTTTTTATCA---AGACCATACGCAAAAGCAGCAGCAGTTG 282368 | || ||| ||||| || | | ||||| || |||| |||||| || || | Sbjct 18536 CGTTTCGTTCCTTGTCAGACTTGCCAGAACCGAGACCGTAGGCAATAGCAGCCGCGGTAG 18595 Query 282369 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 282428 | || || || || | | ||| || ||||| ||||| || ||||| || ||||||| Sbjct 18596 GCTCGTTGATGATGCGGAGAACGTTGAGACCGGCAATGGCACCGGCATCCTTGGTGGCTT 18655 Query 282429 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 ||||||| ||||| || || || |||||||| ||||| || Sbjct 18656 GTCTTTGATTGTCGTTGAAGTAGGCGGGAACAGTGATAACAGC 18698 >seq789 Length=50723 Score = 95.1 bits (104), Expect = 9e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192 ||||| || ||||| | ||||| |||||||||||| ||||| |||| ||| | || ||| Sbjct 30983 GAATTCTTTTTCCACGCCATGGCCGGTCGTGAAGGTCTTATTGATACCGCTGTCAAGACT 31042 Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGA 435239 || || |||||||| |||||| | |||||||||| |||||||| Sbjct 31043 GCCGAGACTGGTTACATTCAACGCCGACTTGTCAAGGCTCTTGAAGA 31089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740557983733350