Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq883 179 7e-40 >seq883 Length=160511 Score = 179 bits (198), Expect = 7e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || |||| ||| || || || | || ||||| || || ||||| || ||||| || Sbjct 38142 CCACCTCGCAATCGGAGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGCTG 38083 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| ||| ||||||||||| |||||||||||| ||||| | || |||||| || || || Sbjct 38082 AGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCGGA 38023 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||||||||| ||||||||||| | ||||||||| || ||||| || | ||| ||| Sbjct 38022 ATTCCTTCCTTGTCTTGAATCTTCGATTTTACATTGTCGATCGTGTCTGATGATTCCACT 37963 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || |||||||| ||||| ||||| ||||| || ||||| Sbjct 37962 TCCAGTGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 37916 Score = 109 bits (120), Expect = 1e-18 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || || |||| |||||||||||||| || || |||||| | | | || Sbjct 37674 CGAAGGACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACTCAAGGTGCGGCCA 37615 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || ||||| || || || || || | ||||||||| ||||| || |||||||| Sbjct 37614 TCCTCGAGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTG 37555 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || |||||||| | |||||||| || || ||||| | | || || || | || || Sbjct 37554 TCCTGAATCTTGGACTTTACATTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATG 37495 Query 82776 GTCTTGCCTGTCA 82788 |||||||| |||| Sbjct 37494 GTCTTGCCGGTCA 37482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981808645000025