Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq73 178 1e-39 seq883 120 3e-22 seq377 100 3e-16 seq1350 84.2 2e-11 seq256 82.4 7e-11 >seq73 Length=89549 Score = 178 bits (196), Expect = 1e-39 Identities = 1099/1732 (63%), Gaps = 63/1732 (4%) Strand=Plus/Minus Query 148062 TGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA-GTCGCTTTATCTTCATCTC 148120 || |||||||| || ||||||||||| ||||| | | || | || || || || || Sbjct 18479 TGATCAATGAAAGCACCACGGTCAGCAGCCATCTGGAGGACGGTGCGTTGGCTG-ATTTC 18421 Query 148121 CCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGA 148180 |||| |||||||||| || ||||| | | | || ||| | |||| ||| | || Sbjct 18420 CCAGACCGTCTTGTATAGAGCTTTGATGTCAGCAGGGATGTTGGGGATGTTCTGAATGGA 18361 Query 148181 GCCGCGGTGCGCAAAAAT-CTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCA 148239 ||||| | ||||| || ||| || ||| | ||| | | || || || | || Sbjct 18360 GCCGCCTTCCGCAATGATTCTG-TTCTTCATGTTGTCGGACCAGAGACCAAGGTCAACCA 18302 Query 148240 GGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGAT 148299 || | | || | |||| || || || || || || || | ||| || || | Sbjct 18301 AATCCTTCAAGAGCCAGGGATTGACGACTTGGAATTCACCAGCCAACACACGACGGGAGT 18242 Query 148300 ACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTG 148359 | | |||| ||| | || || || | |||||||||||||| || || | ||| | || Sbjct 18241 AGATGTTGGACGTGTATGGCTCGAAGCATTCGTTGTTGCCCAAGATTTGAGAGGTGGATG 18182 Query 148360 CCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCT 148419 | || ||||| || || || || |||||||| | ||| | ||| | | | ||| Sbjct 18181 CAGTAGGCATAGGGGCAACAAGGAGAGAGTTGCGAACACCATG-TTTAGCAATCTCAGCT 18123 Query 148420 T-CAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGA 148478 | || || |||| ||||| || || || || || |||||||| || ||||| || Sbjct 18122 TTCAATGCATCCCAATCCCATAGATCTGAAGGAGTAACATTCCACATATCATACTGAAGG 18063 Query 148479 ATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGT 148538 || || | | ||||||||||| || | || || || || || || ||| Sbjct 18062 ATACCTTGTGAGACCGGGCTGCCCTCATAGGTCTCATAGGGACCTTGTTCCTTGGCGAGT 18003 Query 148539 TCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGC 148598 ||||| ||| || || | | ||| || || ||| |||||| ||||||| | Sbjct 18002 TCGCATGACGCAGTCAGAGCTGCATGGTAGATGGTTTCGAAAATTTGGATGTTGAGTTGA 17943 Query 148599 GCCGCCGACTCGCTT-TCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTG 148657 ||| || | ||| | || | ||||| | || || || ||||| ||||| Sbjct 17942 CGGGCCT-CTGGAGAGTCGAAAGGAAGACGCAAAGCAAGGAAGGCATCTGCAAGACCCTG 17884 Query 148658 TACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC---GG 148714 || || | |||| || |||||| | |||| | || ||| || || Sbjct 17883 AACACCAAGACCAACAGGTCGGTGTCGGAAGTTGCTCTTCCTGGCT---TCGGGCACAGG 17827 Query 148715 ATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTGTAA-TTC-T 148771 |||| |||| ||||||||||||| |||| || || || || | |||| ||| | Sbjct 17826 GTAGTAGTTGATATCGATGATCTTGTTCAAGTTT-CGAGTGACGACTTGGGTAACTTCAT 17768 Query 148772 GCGCA--GC--AATTCAAAATC-----GTACTTGTCATCTACGATGCATCGGTTCACGGC 148822 | | || || ||| | || | |||| ||| |||| | | | | || Sbjct 17767 GAAGACGGCCAAAGTCATATTCACCTCGGGCTTG--ATCGACGAAGGTTGGA---AGAGC 17713 Query 148823 GATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGC 148882 | |||||| |||||||| || || ||||||| ||||| |||||||| || || || | Sbjct 17712 CAGAGAGGCGAGATTGCAGACAGCGATCTCATCTGGGGCACTGTACTCGACAATTTCCGT 17653 Query 148883 GCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGC 148942 |||||||||| || ||| |||| |||||| || |||||||| ||||||| || Sbjct 17652 GCACAGATTGGAGCTCCGGATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGC 17593 Query 148943 GTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCGATG 149002 |||||||| ||||| || || || || || ||| | ||| || || | || Sbjct 17592 ATCCTTGTAAAGCATATAAGGAGTCCCGGTCTCGGTCTGTGCTTC---TAGGATCGCATA 17536 Query 149003 C---AGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGT--A 149057 | | | ||| || || ||| || ||||| | ||| ||| || | Sbjct 17535 CCACAACTTCTGGGCCTTGACCGTCTGACGACCTCGTCCCTCTTTCTC--ATACTGTTCA 17478 Query 149058 TACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCAC 149117 || || ||||| ||||||| ||| ||| | || || || || || || || Sbjct 17477 TAGAGGGCATCGAATTCCTCGCCATAGACATCAGCAAGGCCCGGTGCCTCATGAGGACAG 17418 Query 149118 ATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGC 149177 | || | ||| | || | | || || |||| || ||||| || ||| || Sbjct 17417 AACAGAGTCCAGTCTTGGTTCTTCTCGACACGTCTCATGAATAGATCCGGAGTCCAAAGT 17358 Query 149178 GCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGC 149237 || || | | ||| || || ||||| || ||| | |||||| ||| Sbjct 17357 GCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCGTGGTTCTTTCTCAGGTTCAGC 17298 Query 149238 ACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTT- 149296 ||| | ||||||||||| ||||| | || | || | || || ||||| Sbjct 17297 CAATCGAAGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACCGGGACGCTTA 17238 Query 149297 --GCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATG 149354 ||| |||||||| || | || | ||||||| || || |||| ||| || |||| Sbjct 17237 TTGCCACCCTGGTCCACATAACGGGCAGTGTTGTTGAAGACACGAAGCATGGG---AATG 17181 Query 149355 ---CCACTGGCAGTGCCGTTAGTAGAGCTAATGC--GA--CTGCCGCGCGCTCGCACTTT 149407 ||| ||| ||||||||| || | ||| || | | || || ||| | Sbjct 17180 AGACCATTGGAAGTGCCGTTGGTCCCGGCAATATAGGAACCAGTAGCACGAATGCAATGA 17121 Query 149408 GTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGC 149465 | |||||| ||| || ||||| || || ||| ||||| || || ||| ||| Sbjct 17120 G----CGTTGAGGCCAATACCGCCAGCAGT-CTTGGAGATCATAGCACAAGTCTT-GAGA 17067 Query 149466 GTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATT 149525 || ||| || ||||| |||||||| |||||| | || ||||| ||| ||| | Sbjct 17066 GTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGACAAT 17007 Query 149526 TGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGG 149585 || || | |||||||| ||||| || || |||||| || || | |||||| Sbjct 17006 TGAGGTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGTGAAGCACTTCTGG 16947 Query 149586 CTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCG 149645 ||| | | ||| | ||| | | | || |||||||| ||||||||||| | || Sbjct 16946 GACATGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATGGATGCCAACTGCC 16887 Query 149646 ACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAG 149705 || ||||| ||||| || ||||||| ||| ||||||| || ||||| ||||||| || Sbjct 16886 ACACGCATGAGCATGTGTTGCGGTCTCTCGGCCACTTGTTTGCCAATCTTGAGCAGATAT 16827 Query 149706 CCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGT 149757 |||| | |||||| |||| ||||| | ||||| ||||| ||| ||| Sbjct 16826 GATCTTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCGGTCGT 16775 >seq883 Length=160511 Score = 120 bits (132), Expect = 3e-22 Identities = 139/185 (75%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| || |||||||| || |||||||| | || ||| | | | |||||||| Sbjct 37665 AAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACTCAAGGTGCGGCCA-TCCTCGAG 37607 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| ||||| ||| ||||||| || || || || ||||| |||||||||||||| || Sbjct 37606 CTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGAAT 37547 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | || | || ||| ||| ||| || |||| ||||| ||| ||||| Sbjct 37546 CTTGGACTTTACATTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCC 37487 Query 133634 GGTCA 133638 ||||| Sbjct 37486 GGTCA 37482 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || || ||||| || || ||||| || | | ||| ||| ||||| |||||||| Sbjct 37884 GTCGATTCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCTTCGAGTTGCTTGCCG 37825 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || ||||||| || || ||||||||||| || ||||||||||| |||||| ||| Sbjct 37824 GCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCCTGGATCTTGGACTTC 37765 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | || ||| ||| ||| || || | |||| ||| |||||||| ||||| Sbjct 37764 ACATTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTAAGAGTC 37705 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 37704 TTGACGAAGATTTGCAT 37688 >seq377 Length=202478 Score = 100 bits (110), Expect = 3e-16 Identities = 249/373 (67%), Gaps = 15/373 (4%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || ||||| || ||||| || |||||||| || ||| ||| || ||||||| Sbjct 91293 CTGGTAATCACCGACACGCTTCTCGAAGAAGTTTGTCTTTCCCGCCAATGAGATGTTGTC 91234 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 |||||| ||| || || || || |||| ||| | || | | ||| || Sbjct 91233 CATAAAGCTGAAAGGATTCTGGGCATTGTAGTACTTCTTGTTTCCGAGGGCAAGGAGAAG 91174 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 ||||| || || |||||||| || | ||| | ||||||||||| |||| || Sbjct 91173 ACGGTCGGCAACGAACTCAATATATTGTTGCATCAGTTTGGCGTTCATGCCAAGCAGAGC 91114 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 || ||||| || || ||||| |||||||| ||| | || ||||| ||| ||| | Sbjct 91113 GACAGGCAAAGCATCTGTCAAAAATTCCTTCTCGATGACAACAGCCTCGGTGATGATGTC 91054 Query 120591 GAGCAT-AGTGTGG--CCGGGCAT---CTTGTGTTCGATGCGCGTTCGGTAGTACAGGCA 120644 || ||| ||| ||||| | |||| | | | ||| || | || || Sbjct 91053 CTCGATGAGTTTGGGATCGGGCTTATACTTGAGGT-GTTGC---ATCAG-----AAGACA 91003 Query 120645 CGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCC 120704 |||||||| || |||| ||||| || ||||| || ||||| || ||||||| ||| Sbjct 91002 AGCAAAGTCGGTATGCATACCCTCATCACGCGAGATGAGCTCATTCGAGAACGTCAAGCC 90943 Query 120705 GGGCATGATGCCT 120717 ||||| | |||| Sbjct 90942 TGGCATAAGGCCT 90930 >seq1350 Length=234104 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| || |||||||| ||| | || | ||||| ||||| || |||||||||||||| Sbjct 96547 TCCTCAAGTTGCTTGCCGGCGAAGATCAAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTA 96488 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | || |||| | ||| || || | ||||| | Sbjct 96487 TCTTGGATCTTGGACTTGACGTTGTCGATTGTATCGGACGACTCGACCTCAAGGGTGATG 96428 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAA 133651 || ||||| || || || || ||||| Sbjct 96427 GTCTTGCCCGTGAGGGTCTTGACGAA 96402 >seq256 Length=205955 Score = 82.4 bits (90), Expect = 7e-11 Identities = 85/109 (78%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| || ||| | | | || || || |||||||| Sbjct 110792 GTTGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCA-TCTTCAAGTTGCTTGCC 110734 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTG 133571 ||| | || || || |||||||| |||||||||||||||||||| ||| Sbjct 110733 GGCGAAGATCAGGCGTTGCTGGTCAGGAGGGATGCCTTCCTTGTCTGTG 110685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483411886929000