Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq73 107 5e-18 >seq73 Length=89549 Score = 107 bits (118), Expect = 5e-18 Identities = 286/429 (67%), Gaps = 11/429 (3%) Strand=Plus/Plus Query 110674 CTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATC 110733 |||| | ||| || |||| ||| | | ||||||||| ||||||| |||||| | | Sbjct 17168 CTTCCAATGGTCTCATTCCCATGCTTCGTGTCTTCAACAACACTGCCCGTTATGTGGACC 17227 Query 110734 AAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATA 110790 | ||||| |||| | || | ||||| |||||||| || || ||||| | ||| Sbjct 17228 AGGGTGGCAATAAGCGTCCCGGTGCCTTTGCCATCTATCTGGAGCCATGGCACGCGGATG 17287 Query 110791 TATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATT 110850 | || || | | | || | || || || ||| ||||| | || ||||| | Sbjct 17288 TCTTCGATTGGCTGAACCTGAGAAAGAACCACGGAAAGGAAGAGGTTCGCGCCCGTGACT 17347 Query 110851 TATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATG- 110909 | ||||||||| | |||| | | ||| ||||||||| |||||| | |||| | || | Sbjct 17348 TGTTTTATGCACTTTGGACTCCGGATCTATTCATGAGACGTGT-CGAGAAGAAC-CAAGA 17405 Query 110910 -TGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTT 110968 ||| |||| | ||||||||| | || || || ||||||| ||||| | || || Sbjct 17406 CTGGACTCTGTTCTGTCCTCATGAGGCACCGGGCCTTGCTGATGTCTATGGCGAGGAATT 17465 Query 110969 TGAAGACCTTTACGAAAAATATGAAAAAGAAGG-CAAGTTTCGCAAACAAATTCCAGCTC 111027 || | ||| || ||| | ||||| ||||| || | || | || || || || | Sbjct 17466 CGATGCCCTCTATGAACAGTATGAGAAAGAGGGACGAGGTCGTCAGACGG--TCAAGGCC 17523 Query 111028 AAGAACTT-TGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTG 111086 |||| || |||| ||||| ||| |||| || || || ||||||||||| | Sbjct 17524 CAGAAGTTGTGGTATGCGATCCTAGAAGCACAGACCGAGACCGGGACTCCTTATATGCTT 17583 Query 111087 TATAAAGAT 111095 || || ||| Sbjct 17584 TACAAGGAT 17592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186790371092475