Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq883 111 4e-19 >seq883 Length=160511 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || | || || || || ||||| ||||||||||| || ||| Sbjct 37919 CAAATCTTTGTCAAGACCTTGACTGGCAAGACCATCACACTGGAAGTGGAATCATCAGAC 37978 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| ||||| ||||||||||| || ||||||||| ||||||| ||| Sbjct 37979 ACGATCGACAATGTAAAATCGAAGATTCAAGACAAGGAAGGAATTCCGCCGGACCAACAA 38038 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | |||||||| ||||| || || ||||| || | ||| | ||| || ||| || Sbjct 38039 CGATTGATCTTCGCTGGAAAACAATTAGAAGACGGTCGAACTCTCAGCGACTATAACATC 38098 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| ||||| || || || Sbjct 38099 CAGAAGGAGTCGACTCTCCATCTCGT 38124 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || | || ||||| || || || |||||||| ||| ||| ||| Sbjct 38147 CAGATCTTTGTCAAGACCTTGACCGGAAAGACTATTACGTTGGAAGTTGAATCTTCGGAC 38206 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| |||||| || || ||||| || ||| ||||| || Sbjct 38207 ACTATTGACAACGTCAAGTCAAAGATCCAGGATAAAGAGGGTATTCCACCGGATCAACAG 38266 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||| || || ||||| |||||||||||| | ||| | | || ||||| | Sbjct 38267 CGATTGATCTTTGCAGGCAAGCAATTGGAAGATGGACGCACTCTTTCTGACTACAATATT 38326 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||| ||||| || | || ||||||||||| Sbjct 38327 CAGAAGGAGAGCACTCTGCATTTGGTGTTGAGACTTCG 38364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181798465433475