Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq73 167 2e-36
seq377 111 1e-19
seq883 98.7 9e-16
>seq73
Length=89549
Score = 167 bits (184), Expect = 2e-36
Identities = 622/960 (65%), Gaps = 29/960 (3%)
Strand=Plus/Minus
Query 147465 AGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCA 147524
||| || ||||||||||| || |||| || | | | ||||||| || ||||| | |||
Sbjct 17709 AGAGGCGAGATTGCAGACAGCGATCTCATCTGGGGCACTGTACTCGACAATTTCCGTGCA 17650
Query 147525 CAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTC 147584
||| ||| || || |||| || | ||| ||||| ||| ||||| || ||
Sbjct 17649 CAGATTGGAGCTCCGGATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCATC 17590
Query 147585 TTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATG 147641
||| | ||||| || || ||||||||| || | ||| | ||| | |||
Sbjct 17589 CTTGTAAAGCATATAAGGAGTCCCGGTCTCGGTCTGTGCTTCTAGGATCGCATACCA--- 17533
Query 147642 CAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAA 147701
|| | ||| || ||| ||| ||| || ||||| || || ||| | || || |
Sbjct 17532 CAACTTCTGGGCCTTGACCGTCTGACGACCTCGTCCCTCTTTCTCATACTGTTCATAGAG 17473
Query 147702 CCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAG 147761
|| || || ||||| ||| ||| |||||||| || || ||| ||||| | |||
Sbjct 17472 GGCATCGAATTCCTCGCCATAGACATCAGCAAGGCCCGGTGCCTCATGAGGACAGAACAG 17413
Query 147762 CGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTA 147821
| ||| | || | | || |||| ||| || |||||||| ||| || || ||
Sbjct 17412 AGTCCAGTCTTGGTTCTTCTCGACACGTCTCATGAATAGATCCGGAGTCCAAAGTGCATA 17353
Query 147822 CATAAGATCGCGCGCTTTGCAATCCTCGGCGC--CCATGTTGCGTT-TCAAATTAAGC-A 147877
| | || || || || | |||| | || || | | || ||| || ||| |
Sbjct 17352 AAACAAGTCACGGGC---GCGAACCTCTTCCTTTCCGTGGTTCTTTCTCAGGTTCAGCCA 17296
Query 147878 CGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT- 147936
| | ||| || |||||||| || || | |||| ||| | ||||| ||||||
Sbjct 17295 ATCGA-AGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACCGGGACGCTTAT 17237
Query 147937 --CCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGC 147994
|| |||||||| |||| || | ||||||| || || || | |||||| || |
Sbjct 17236 TGCCACCCTGGTCCACATAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAGAC 17177
Query 147995 CGCTCGCAGTGCCGTTGGT---GGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCA 148051
| | | |||||||||||| || | || | | || || || | ||
Sbjct 17176 CATTGGAAGTGCCGTTGGTCCCGGCA---ATATAGGAACCAGTAGCACGAATGCAATGAG 17120
Query 148052 CGTTAACGCCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAA-TCGCCCAA-TGTCG 148108
|||| | |||||| ||||| || || ||| || || ||| ||| || | |||||
Sbjct 17119 CGTTGAGGCCAATACCGCCAGCAGT-CTTGGAGATCATAGCACAAGTCTTGAGAGTGTCG 17061
Query 148109 TGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCG 148168
| | || || || |||||||| | ||| | | | | ||| || || || ||| ||| |
Sbjct 17060 T--AAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGACAATTGAG 17003
Query 148169 GAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCA 148228
| | | || || || ||| || || ||| ||||| || || | || || ||
Sbjct 17002 GTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGTGAAGCACTTCTGGGACA 16943
Query 148229 TCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGC 148288
| | | || ||||| || || | |||||||| || || || ||||| | || || |
Sbjct 16942 TGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATGGATGCCAACTGCCACAC 16883
Query 148289 GCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCAT 148348
||||||||||||| || |||| ||||| ||||| ||| |||||||| ||||||
Sbjct 16882 GCATGAGCATGTGTTGCGGTCTCTCGGCCACTTGTTTGCCAATCTTGAGCAGATATGATC 16823
Query 148349 TTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408
|||| | || ||| | || ||||| | ||| | || ||| | |||||| |||||||||
Sbjct 16822 TTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCGGTCGTAAACGATGGCCG 16763
>seq377
Length=202478
Score = 111 bits (122), Expect = 1e-19
Identities = 252/370 (68%), Gaps = 17/370 (5%)
Strand=Plus/Plus
Query 46907 AGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACA 46966
|||| | ||||| ||| |||||||| || ||| | |||||||| || || || | ||
Sbjct 90930 AGGCCTTATGCCAGGCTTGACGTTCTCGAATGAGCTCATCTCGCGTGATGAGGGTATGCA 90989
Query 46967 CACGGACTTTGCGTGTCT-CTATTACAAGACGCGCGTGAATGAGAA--ATT--AAACTCG 47021
|| |||||||| ||||| || | ||| || | | | || || || ||||||
Sbjct 90990 TACCGACTTTGCTTGTCTTCTGATGCAACAC-CTCAAGTATAAGCCCGATCCCAAACTC- 91047
Query 47022 GACACGATCCTGAGCATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCG 47081
||| | ||| | | ||||| || |||||| ||||| ||||| || |
Sbjct 91048 ------ATCGAGGACATCATCACCGAGGCTGTTGTCATCGAGAAGGAATTTTTGACAGAT 91101
Query 47082 GCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCT-ATGTGCGAATATATTGAGTT 47140
|| |||| ||||| |||| ||||||||||| || || ||| |||||||||||||
Sbjct 91102 GCTTTGCCTGTCGCTCTGCTTGGCATGAACGC-CAAACTGATGCAACAATATATTGAGTT 91160
Query 47141 TGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACCGAAATATTTTAATGCTCGTAATCC 47200
|| || || ||||| | | |||||| | ||| || | ||||| | |||||
Sbjct 91161 CGTTGCCGACCGTCTTCTCCTTGCCCTCGGAAACAAGAAGTACTACAATGCCCAGAATCC 91220
Query 47201 GTTTGAG-TTTATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAG 47259
||| || |||||| ||||||| || | | ||| || || || || |||||||| || |
Sbjct 91221 -TTTCAGCTTTATGGACAACATCTCATTGGCGGGAAAGACAAACTTCTTCGAGAAGCGTG 91279
Query 47260 TCGGAGAGTA 47269
|||| || ||
Sbjct 91280 TCGGTGATTA 91289
>seq883
Length=160511
Score = 98.7 bits (108), Expect = 9e-16
Identities = 99/129 (77%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||| | ||| | |||||||| | | | || ||||| ||||||||||| || |||| |||
Sbjct 37681 ACGGAGGCGAAGGACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACTCAAGGT 37622
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| ||| ||||||||||| |||| | || ||||| |||||||| ||||| |||||
Sbjct 37621 GCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATGCC 37562
Query 132022 TTCTTTATC 132030
||| || ||
Sbjct 37561 TTCCTTGTC 37553
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476602412481000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |