Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq73 167 2e-36 seq377 111 1e-19 seq883 98.7 9e-16 >seq73 Length=89549 Score = 167 bits (184), Expect = 2e-36 Identities = 622/960 (65%), Gaps = 29/960 (3%) Strand=Plus/Minus Query 147465 AGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCA 147524 ||| || ||||||||||| || |||| || | | | ||||||| || ||||| | ||| Sbjct 17709 AGAGGCGAGATTGCAGACAGCGATCTCATCTGGGGCACTGTACTCGACAATTTCCGTGCA 17650 Query 147525 CAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTC 147584 ||| ||| || || |||| || | ||| ||||| ||| ||||| || || Sbjct 17649 CAGATTGGAGCTCCGGATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCATC 17590 Query 147585 TTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATG 147641 ||| | ||||| || || ||||||||| || | ||| | ||| | ||| Sbjct 17589 CTTGTAAAGCATATAAGGAGTCCCGGTCTCGGTCTGTGCTTCTAGGATCGCATACCA--- 17533 Query 147642 CAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAA 147701 || | ||| || ||| ||| ||| || ||||| || || ||| | || || | Sbjct 17532 CAACTTCTGGGCCTTGACCGTCTGACGACCTCGTCCCTCTTTCTCATACTGTTCATAGAG 17473 Query 147702 CCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAG 147761 || || || ||||| ||| ||| |||||||| || || ||| ||||| | ||| Sbjct 17472 GGCATCGAATTCCTCGCCATAGACATCAGCAAGGCCCGGTGCCTCATGAGGACAGAACAG 17413 Query 147762 CGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTA 147821 | ||| | || | | || |||| ||| || |||||||| ||| || || || Sbjct 17412 AGTCCAGTCTTGGTTCTTCTCGACACGTCTCATGAATAGATCCGGAGTCCAAAGTGCATA 17353 Query 147822 CATAAGATCGCGCGCTTTGCAATCCTCGGCGC--CCATGTTGCGTT-TCAAATTAAGC-A 147877 | | || || || || | |||| | || || | | || ||| || ||| | Sbjct 17352 AAACAAGTCACGGGC---GCGAACCTCTTCCTTTCCGTGGTTCTTTCTCAGGTTCAGCCA 17296 Query 147878 CGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT- 147936 | | ||| || |||||||| || || | |||| ||| | ||||| |||||| Sbjct 17295 ATCGA-AGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACCGGGACGCTTAT 17237 Query 147937 --CCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGC 147994 || |||||||| |||| || | ||||||| || || || | |||||| || | Sbjct 17236 TGCCACCCTGGTCCACATAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAGAC 17177 Query 147995 CGCTCGCAGTGCCGTTGGT---GGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCA 148051 | | | |||||||||||| || | || | | || || || | || Sbjct 17176 CATTGGAAGTGCCGTTGGTCCCGGCA---ATATAGGAACCAGTAGCACGAATGCAATGAG 17120 Query 148052 CGTTAACGCCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAA-TCGCCCAA-TGTCG 148108 |||| | |||||| ||||| || || ||| || || ||| ||| || | ||||| Sbjct 17119 CGTTGAGGCCAATACCGCCAGCAGT-CTTGGAGATCATAGCACAAGTCTTGAGAGTGTCG 17061 Query 148109 TGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCG 148168 | | || || || |||||||| | ||| | | | | ||| || || || ||| ||| | Sbjct 17060 T--AAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGACAATTGAG 17003 Query 148169 GAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCA 148228 | | | || || || ||| || || ||| ||||| || || | || || || Sbjct 17002 GTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGTGAAGCACTTCTGGGACA 16943 Query 148229 TCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGC 148288 | | | || ||||| || || | |||||||| || || || ||||| | || || | Sbjct 16942 TGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATGGATGCCAACTGCCACAC 16883 Query 148289 GCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCAT 148348 ||||||||||||| || |||| ||||| ||||| ||| |||||||| |||||| Sbjct 16882 GCATGAGCATGTGTTGCGGTCTCTCGGCCACTTGTTTGCCAATCTTGAGCAGATATGATC 16823 Query 148349 TTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 |||| | || ||| | || ||||| | ||| | || ||| | |||||| ||||||||| Sbjct 16822 TTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCGGTCGTAAACGATGGCCG 16763 >seq377 Length=202478 Score = 111 bits (122), Expect = 1e-19 Identities = 252/370 (68%), Gaps = 17/370 (5%) Strand=Plus/Plus Query 46907 AGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACA 46966 |||| | ||||| ||| |||||||| || ||| | |||||||| || || || | || Sbjct 90930 AGGCCTTATGCCAGGCTTGACGTTCTCGAATGAGCTCATCTCGCGTGATGAGGGTATGCA 90989 Query 46967 CACGGACTTTGCGTGTCT-CTATTACAAGACGCGCGTGAATGAGAA--ATT--AAACTCG 47021 || |||||||| ||||| || | ||| || | | | || || || |||||| Sbjct 90990 TACCGACTTTGCTTGTCTTCTGATGCAACAC-CTCAAGTATAAGCCCGATCCCAAACTC- 91047 Query 47022 GACACGATCCTGAGCATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCG 47081 ||| | ||| | | ||||| || |||||| ||||| ||||| || | Sbjct 91048 ------ATCGAGGACATCATCACCGAGGCTGTTGTCATCGAGAAGGAATTTTTGACAGAT 91101 Query 47082 GCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCT-ATGTGCGAATATATTGAGTT 47140 || |||| ||||| |||| ||||||||||| || || ||| ||||||||||||| Sbjct 91102 GCTTTGCCTGTCGCTCTGCTTGGCATGAACGC-CAAACTGATGCAACAATATATTGAGTT 91160 Query 47141 TGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACCGAAATATTTTAATGCTCGTAATCC 47200 || || || ||||| | | |||||| | ||| || | ||||| | ||||| Sbjct 91161 CGTTGCCGACCGTCTTCTCCTTGCCCTCGGAAACAAGAAGTACTACAATGCCCAGAATCC 91220 Query 47201 GTTTGAG-TTTATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAG 47259 ||| || |||||| ||||||| || | | ||| || || || || |||||||| || | Sbjct 91221 -TTTCAGCTTTATGGACAACATCTCATTGGCGGGAAAGACAAACTTCTTCGAGAAGCGTG 91279 Query 47260 TCGGAGAGTA 47269 |||| || || Sbjct 91280 TCGGTGATTA 91289 >seq883 Length=160511 Score = 98.7 bits (108), Expect = 9e-16 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| | ||| | |||||||| | | | || ||||| ||||||||||| || |||| ||| Sbjct 37681 ACGGAGGCGAAGGACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACTCAAGGT 37622 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || ||| ||||||||||| |||| | || ||||| |||||||| ||||| ||||| Sbjct 37621 GCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATGCC 37562 Query 132022 TTCTTTATC 132030 ||| || || Sbjct 37561 TTCCTTGTC 37553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476602412481000