Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq73 98.7 9e-16
seq883 96.9 3e-15
>seq73
Length=89549
Score = 98.7 bits (108), Expect = 9e-16
Identities = 195/286 (68%), Gaps = 12/286 (4%)
Strand=Plus/Minus
Query 138126 AGCACGAATT---TGAGTTACGTTGAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGC 138182
||||||||| |||| |||||||||| || ||||| | || || ||||| ||
Sbjct 17136 AGCACGAATGCAATGAG---CGTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGC 17080
Query 138183 ACAATCGTTGAGAGTTCTATAGATGCCGTTTATGCTGTCTTCCTGGATGTTGAGTAGATA 138242
|||| |||||||| || || || | |||||||| || | |||| || | |
Sbjct 17079 ACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAA 17020
Query 138243 ACACGACGACATTTGAGGCATTTTCA---TGCCAGCCGAGAATAGAGTGGGACTAGCGTG 138299
|| || |||| |||||| || | |||| || ||| ||||| ||| |||||
Sbjct 17019 GCATGAGGACAATTGAGG---TTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTG 16963
Query 138300 GGTAAACATTTTCGAGCGCATCAATCTATATGACTCGATCGCACTCTCGATATCATCACC 138359
||| || ||| | ||| | | || | ||| ||||| ||||||| ||||| ||
Sbjct 16962 GGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCC 16903
Query 138360 ATGAATCTGAAGAGCGACACGCATCAGCATGTGTTGAGGTCTCTCG 138405
||| || || || |||||||| ||||||||||| |||||||||
Sbjct 16902 ATGGATGCCAACTGCCACACGCATGAGCATGTGTTGCGGTCTCTCG 16857
>seq883
Length=160511
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || || || | ||||| || | ||||| | || ||||| ||| |
Sbjct 37688 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 37747
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
||||| ||||| | || || || || || || || ||||| || ||||| ||
Sbjct 37748 GATACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAA 37807
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
||| | ||||||| | |||||| ||||||||||| | | | | |||| || |||||
Sbjct 37808 CAACGTCTCATTTTTGCCGGCAAGCAACTCGAAGACGGCCGCACTCTCAGTGACTACAAC 37867
Query 25355 ATTCAAAAAGAATCCACCATTCA 25377
|| ||||||||||| || ||||
Sbjct 37868 ATCCAAAAAGAATCGACTCTTCA 37890
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445086193572000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |