Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq73 98.7 9e-16 seq883 96.9 3e-15 >seq73 Length=89549 Score = 98.7 bits (108), Expect = 9e-16 Identities = 195/286 (68%), Gaps = 12/286 (4%) Strand=Plus/Minus Query 138126 AGCACGAATT---TGAGTTACGTTGAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGC 138182 ||||||||| |||| |||||||||| || ||||| | || || ||||| || Sbjct 17136 AGCACGAATGCAATGAG---CGTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGC 17080 Query 138183 ACAATCGTTGAGAGTTCTATAGATGCCGTTTATGCTGTCTTCCTGGATGTTGAGTAGATA 138242 |||| |||||||| || || || | |||||||| || | |||| || | | Sbjct 17079 ACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAA 17020 Query 138243 ACACGACGACATTTGAGGCATTTTCA---TGCCAGCCGAGAATAGAGTGGGACTAGCGTG 138299 || || |||| |||||| || | |||| || ||| ||||| ||| ||||| Sbjct 17019 GCATGAGGACAATTGAGG---TTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTG 16963 Query 138300 GGTAAACATTTTCGAGCGCATCAATCTATATGACTCGATCGCACTCTCGATATCATCACC 138359 ||| || ||| | ||| | | || | ||| ||||| ||||||| ||||| || Sbjct 16962 GGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCC 16903 Query 138360 ATGAATCTGAAGAGCGACACGCATCAGCATGTGTTGAGGTCTCTCG 138405 ||| || || || |||||||| ||||||||||| ||||||||| Sbjct 16902 ATGGATGCCAACTGCCACACGCATGAGCATGTGTTGCGGTCTCTCG 16857 >seq883 Length=160511 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || || || | ||||| || | ||||| | || ||||| ||| | Sbjct 37688 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 37747 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| ||||| | || || || || || || || ||||| || ||||| || Sbjct 37748 GATACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAA 37807 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | ||||||| | |||||| ||||||||||| | | | | |||| || ||||| Sbjct 37808 CAACGTCTCATTTTTGCCGGCAAGCAACTCGAAGACGGCCGCACTCTCAGTGACTACAAC 37867 Query 25355 ATTCAAAAAGAATCCACCATTCA 25377 || ||||||||||| || |||| Sbjct 37868 ATCCAAAAAGAATCGACTCTTCA 37890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445086193572000