Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq73 109 8e-18
seq377 100 4e-15
>seq73
Length=89549
Score = 109 bits (120), Expect = 8e-18
Identities = 256/388 (66%), Gaps = 15/388 (4%)
Strand=Plus/Plus
Query 259795 CGAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGT 259854
|||| | || || | |||||||||||||| || ||||| |||| || || |
Sbjct 16857 CGAGAGACCGCAACACATGCTCATGCGTGTGGCAGTTGGCATCCATGGAGATG---ACAT 16913
Query 259855 CGACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTCAC 259914
||| || ||| | ||| |||||| | |||||| ||| ||| |||||
Sbjct 16914 CGAGAAGGCGATAGAG------------ACCTACAACCTCATGTCCCAGAAGTGCTTCAC 16961
Query 259915 CTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTT 259974
| || | || || || || ||||||||||| |||| || || || || |||||
Sbjct 16962 CCACGCCTCTCCAACTCTGTTCAATGCCGGCACTCCGCAACCTCAATTGTCCTCATGCTT 17021
Query 259975 TCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGC 260034
|| | |||||||| | || || ||||| || || ||||| |||||| || ||
Sbjct 17022 CTTGGTCGACATGAAAGAGGACAGCATTGAGGGAATTTACGACACTCTCAAGACTTGTGC 17081
Query 260035 GCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGG 260094
| ||||||||| | || ||||| || || | ||| || | || || | ||
Sbjct 17082 TATGATCTCCAAGACTGCTGGCGGTATTGGCCTCAACGCTCATTGCATTCGTGCTACTGG 17141
Query 260095 CGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTT 260154
|||| | || || ||||||||| ||||| || || | ||||||||||| || ||
Sbjct 17142 TTCCTATATTGCCGGGACCAACGGCACTTCCAATGGTCTCATTCCCATGCTTCGTGTCTT 17201
Query 260155 TAACGACACGGCGCGCTACGTCGACCAG 260182
||| |||| || || || || ||||||
Sbjct 17202 CAACAACACTGCCCGTTATGTGGACCAG 17229
>seq377
Length=202478
Score = 100 bits (110), Expect = 4e-15
Identities = 179/258 (69%), Gaps = 9/258 (3%)
Strand=Plus/Plus
Query 1456000 TTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTAC 1456059
|||||| || ||||||||||| ||||| || | ||| | || ||||||||||||
Sbjct 90624 TTCCAGGTCATGATCGAAAACATTCACTCAGAGATGTACAGCTTGCTCATCGACACCTAC 90683
Query 1456060 GTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTG 1456119
|||| || || | ||| | | |||||| |||||| || || | || | |
Sbjct 90684 ATCAAAGATCCCAAACAAAAGTCCTATCTCTTTGACGCCATTGATACTATCCCCTGCATC 90743
Query 1456120 AGGAAAAAGGCCGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTG 1456176
| || ||||| |||||||| ||||||||||| |||||||| || | ||| |
Sbjct 90744 CGCAAGAAGGCTGACTGGGCCTTGAAGTGGATCTCAGACAAGGAG----TCTA-GCTTCG 90798
Query 1456177 CCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG 1456235
|| | || ||||||| || | | |||||| ||||| || ||||| ||| ||| |
Sbjct 90799 CCCAACGCCTCGTCGCATTCTCTGCCGTCGAAGGCATTTTCTTCTCCGGCTCATTCGCCT 90858
Query 1456236 CCATCTTTTGGCTCAAGA 1456253
||||||| ||||| ||||
Sbjct 90859 CCATCTTCTGGCTGAAGA 90876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177668933538950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |