Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq73 259 6e-64 >seq73 Length=89549 Score = 259 bits (286), Expect = 6e-64 Identities = 1116/1741 (64%), Gaps = 35/1741 (2%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 |||||||||||||| || ||||| |||||| ||||||| || | ||||| || | Sbjct 18587 CGGAGGTAGTACATTCCAGTCTTCAGCCCCATCTTCCAGCCAGCGAAGTGCATGGATGTG 18528 Query 117897 AACTTGGAGAGGGTTGGA--CTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGA 117954 | |||| | || || ||| ||| || ||| | | |||||||||||| |||| Sbjct 18527 ATCTTGCCCATAGTGGGCTCCTTGAGATG--GATGTTGAGAGATTGGGATTGATCAATGA 18470 Query 117955 AGCGTCCCCGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTCCCACACAGTC 118013 | || || || || ||||| | | || | | | || ||||||||| || ||| Sbjct 18469 AAGCACCACGGTCAGCAGCCATCTGGAGGACGGTGCGTTGGCT-GATTTCCCAGACCGTC 18411 Query 118014 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACC---C 118070 |||| || || || ||| | ||||| | ||| || || ||||| || || | Sbjct 18410 TTGTATAGAGCTTTGATGTCAGCAGGGATGTTGGGGATGTTCTGAATGGAGCCGCCTTCC 18351 Query 118071 GCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCC 118130 || ||| || | |||||| | | ||||||||||||| | | ||||| | Sbjct 18350 GCAATGATTCTG---TTCTTCATGTTGTCGGACCAGAGACCAAGGTCAACCAAATCCTTC 18294 Query 118131 ACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTG 118190 | ||| |||||| || || ||||| || | || | ||||| ||| Sbjct 18293 AAGAGCCAGGGATTGACGACTTGGAATTCACCAGCCAACACACGACGGGAGTAGATGTTG 18234 Query 118191 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGC 118250 | |||||||||||| ||||| || ||||| ||||||||||| | ||||| || || ||| Sbjct 18233 GACGTGTATGGCTCGAAGCATTCGTTGTTGCCCAAGATTTGAGAGGTGGATGCAGTAGGC 18174 Query 118251 ATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCG 118310 || || || | || || ||| || | ||| | || ||| | || | || Sbjct 18173 ATAGGGGCAACAAGGAGAGAGTTGCGAACACCATGTTTAGCAATCTCAGCTTTCAATGCA 18114 Query 118311 TCCCAGTCGTAGTTGAGCTTT-GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTG 118369 ||||| || | | || || | | | |||||||||| |||| ||||||||||| Sbjct 18113 TCCCAATCCCA-TAGATCTGAAGGAGTAACATTCCACATATCATACTGAAGGATACCTTG 18055 Query 118370 GGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCT 118429 || | || |||||| | |||||||| || || | ||| || | |||| | Sbjct 18054 TGAGACCGGGCTGCCCTCATAGGTCTCATAGGGACCTTGTTCCTTGGCGAGTTCGCATGA 17995 Query 118430 CGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCA-TTGCCTTGGCCT 118488 ||| || ||||| || || || ||||| ||||| | || | ||| | ||||| Sbjct 17994 CGCAGTCAGAGCTGCATGGTAGATGGTTTCGAAAATTTGGATGTTGAGTTGACG-GGCCT 17936 Query 118489 CGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGA 118548 | || || || | || || | || || |||| || ||||| || ||||| | Sbjct 17935 CTGGAGAGTCGAAAGGAAGACGCAAAGCAAGGAAGGCATCTGCAAGACCCTGAACACCAA 17876 Query 118549 GGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCC 118608 | |||| || || |||| | || ||||| || ||| || || | || Sbjct 17875 GACCAACAGGTCGGTGTCGGAAGTTGCTCTTCCTGGCTTCGGGCACAGGGTAGTAGTTGA 17816 Query 118609 TATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGT 118668 ||||||| | | | || | ||| ||||| || | || | ||||||||| | Sbjct 17815 TATCGATGATCTTGTTCAAGTTTCGAGTGACGACTTGGGTAACTTCATGAAGACGGCCAA 17756 Query 118669 AATCAAA---ACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGAT 118725 | ||| | || || | ||| || ||| | | ||||| || | || || |||| Sbjct 17755 AGTCATATTCACCTCGGG---CTTGATCGACGAAGGTTGGAAGAGCCAGAGAGGCGAGAT 17699 Query 118726 TACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAAC 118785 | || |||| | ||||||| || ||||||| | |||||||||||||| || || | Sbjct 17698 TGCAGACAGCGATCTCATCTGGGGCACTGTACTCGACAATTTCCGTGCACAGATTGGAGC 17639 Query 118786 TCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCA 118845 || || || |||| |||||| || || ||| |||| || |||||||||||||||| Sbjct 17638 TCCGGATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCA 17579 Query 118846 TGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA-GACATCGGCAGCT 118904 | || || ||||| ||||| || || | | || || || | ||| || || | || Sbjct 17578 TATAAGGAGTCCCGGTCTCGGTCTGTGCTTCTAGGATCGCATACCACAACTTCTGGGCCT 17519 Query 118905 GGCACAG--TGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACT 118962 | || | || || |||| ||||||| ||| |||| | |||||||| || || | Sbjct 17518 TG-ACCGTCTGACG--ACCTCGTCCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATT 17462 Query 118963 CTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGAC 119022 | || || | | || | || || ||||||| || || ||||| |||| ||| | Sbjct 17461 CCTCGCCATAGACATCAGCAAGGCCCGGTGCCTCATGAGGACAGAACAGAGTCCAGTCTT 17402 Query 119023 CACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCC 119082 || ||| || || ||||||| || || || |||| || || | || | || | Sbjct 17401 GGTTCTTCTCGACACGTCTCATGAATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCAC 17342 Query 119083 GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCG 119142 | |||| | ||||| | || || || | || | || | || | || ||||| Sbjct 17341 GGGCGCGAACCTCTTCCTTTCCGTGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCG 17282 Query 119143 CGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTA 119199 ||||||| || ||||| || | || | | || ||| | ||| |||||| | Sbjct 17281 CGTGCCATGGCTCCAGATAGATGGCAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCA 17222 Query 119200 CATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCAT 119259 |||| | |||||| ||| || ||||||||||| ||||||| ||||| ||| ||| | Sbjct 17221 CATAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAGACCATTGGAAGTGCCGT 17162 Query 119260 TTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCC 119319 | ||||| |||| || | | || | | || || | |||||||| | Sbjct 17161 TGGTCCCGGCAATATAGGAACCAGTAGCACGAATGCAATGAGCGTTGAGGCCAATACCGC 17102 Query 119320 CTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGT 119379 | || ||| ||||| || || | ||||| || |||| || || || || || Sbjct 17101 CAGCAGTCTTGGAGATCATAGCACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGT 17042 Query 119380 CACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGA 119439 | | || | ||| | |||||| |||| |||||| || || || || |||| Sbjct 17041 CCTCTTTCATGTCGACCAAGAAGCATGAGGACAATTGAGGTTGCGGAGTGCCGGCATTGA 16982 Query 119440 AGAGAGTTGGTGTCGCGTGGATGAA-CATACCTTGGGACATCTTGTCGTAGGTCTCCA-A 119497 | |||||||| | |||||| |||| || | |||||||| || ||||||||| | Sbjct 16981 ACAGAGTTGGAGAGGCGTGGGTGAAGCACTTC-TGGGACATGAGGTTGTAGGTCTCTATC 16923 Query 119498 GACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 119557 | | | | ||||| || || || || || | | || ||||| | ||||| ||| || Sbjct 16922 GCCTTCTCG-ATGTCATCTCCATGGATGCCAACTGCCACACGCATGAGCATGTGTTGCGG 16864 Query 119558 T 119558 | Sbjct 16863 T 16863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618423797601000