Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq73 244 1e-59 >seq73 Length=89549 Score = 244 bits (270), Expect = 1e-59 Identities = 891/1383 (64%), Gaps = 25/1383 (2%) Strand=Plus/Plus Query 104229 ACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGA 104288 ||||| ||||||| ||||| | || || ||||| || ||||| || | | |||| Sbjct 16871 ACATGCTCATGCGTGTGGCAGTTGGCATCCATGGAGATGACATCGAGAAGGCGATAGAGA 16930 Query 104289 CATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAACCCTCTTCAATGCT 104347 | ||| || |||||||| | || |||| ||||| | ||||| || |||||||| Sbjct 16931 CCTACAACCTCATGTCCCA-GAAGTGCTTCACCCACGCCTCTCCAACTCTGTTCAATGCC 16989 Query 104348 GGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATC 104407 || || || ||| ||| ||||| |||||| | ||| || || |||||| || Sbjct 16990 GGCACTCCGCAACCTCAATTGTCCTCATGCTTCTTGGTCGACATGAAAGAGGACAGCATT 17049 Query 104408 AACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATT 104467 | || || || | ||||| | | ||||| ||||| ||| ||||| |||||| Sbjct 17050 GAGGGAATTTACGACACTCTCAAGACTTGTGCTATGATCTCCAAGACTGCTGGCGGTATT 17109 Query 104468 GGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAA 104527 || | || ||| | | || | | || |||| ||||| || || Sbjct 17110 GGCCTCAACGCTCATTGCATTCGTGCTACTGGTTCCTATATTGCCGGGACCAACGGCACT 17169 Query 104528 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 104587 || ||||| | ||||| |||||||| || || ||| ||| || || ||||| | || Sbjct 17170 TCCAATGGTCTCATTCCCATGCTTCGTGTCTTCAACAACACTGCCCGTTATGTGGACCAG 17229 Query 104588 GCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGAT 104641 | ||| ||||| || | | || ||||||| |||||||||||||||||| Sbjct 17230 GGTGGCAATAAGCGTCCC---GGTGCCTTTGCCATCTATCTGGAGCCATGGCACGCGGAT 17286 Query 104642 ATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGAT 104701 || | || | || | || | ||||| || | || |||| || ||| || Sbjct 17287 GTCTTCGATTGGCTGAACCTGAGAAAGAACCACGGAAAGGAAGAGGTTCGCGCCCGTGAC 17346 Query 104702 CTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAAT 104761 | || | || || |||| ||| ||||| ||||||| | || ||| ||| | Sbjct 17347 TTGTTTTATGCACTTTGGACTCCGGATCTATTCATGAGACGTGTCGAGAAGAACCAAGAC 17406 Query 104762 TGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTT 104821 ||| |||| || ||||| | ||||||| || || | |||| | || ||||| || Sbjct 17407 TGGACTCTGTTCTGTCCTCATGAGGCACCGGGCCTTGCTGATGTCTATGGCGAGGAATTC 17466 Query 104822 GAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCC 104881 || ||||| || | |||| ||| |||| || || | | |||||| | || | Sbjct 17467 GATGCCCTCTATGAACAGTATGAGAAAGAGGGACGAGGTCGTCAGACGGT-CAAGGCCCA 17525 Query 104882 GATGT-GTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTA 104940 || || |||| | || || || | | || |||||||| || || || || |||||||| Sbjct 17526 GAAGTTGTGGTATGCGATCCTAGAAGCACAGACCGAGACCGGGACTCCTTATATGCTTTA 17585 Query 104941 CAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAA 105000 ||| || ||||| ||| | ||||| || || ||||| |||| ||| ||| ||||| Sbjct 17586 CAAGGATGCCTGCAACAAGAAGAGCAACCAGAAGAACCTGGGGACAATCCGGAGCTCCAA 17645 Query 105001 TCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGC 105060 ||| || || ||||| | || | | | | |||||||| ||||| || || ||||| Sbjct 17646 TCTGTGCACGGAAATTGTCGAGTACAGTGCCCCAGATGAGATCGCTGTCTGCAATCTCGC 17705 Query 105061 ATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACT 105120 || | ||||| || | | || |||| || | || ||| | || || Sbjct 17706 CTCTCTGGCTCTTCCAACCTTCGTCGATCAAGCCCGAGGTGAATATGACTTTGGCCGTCT 17765 Query 105121 CCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTA 105180 || |||||||| || ||||| |||| | |||| | || |||| || | || Sbjct 17766 TCATGAAGTTACCCAAGTCGTCACTCGAAACTTGAACAAGATCATCGATATCAACTACTA 17825 Query 105181 CCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCA 105240 ||| || || | || || | ||||||| || ||||||| |||||||| Sbjct 17826 CCCTGTGCCCGAAGCCAGGAAGAGCAACTTCCGACACCGACCTGTTGGTCTTGGTGTTCA 17885 Query 105241 GGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGG 105299 |||||| || |||| ||| || ||||| || | | || || || || || Sbjct 17886 GGGTCTTGCAGATGCCTTCCTTGCTTTG-CGTCTTCCTTTCGACTCTCCAGAGGCCCGTC 17944 Query 105300 AAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGT 105359 || |||| | || || || ||||| || || || ||||| ||| | || Sbjct 17945 AACTCAACATCCAAATTTTCGAAACCATCTACCATGCAGCTCTGACTGCGTCATGCGAAC 18004 Query 105360 TGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGC 105419 | || ||| | ||||| ||||| |||| |||||| || | |||||||| | | Sbjct 18005 TCGCCAAGGAACAAGGTCCCTATGAGACCTATGAGGGCAGCCCGGTCTCACAAGGTATCC 18064 Query 105420 TTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA---CTA--CGACTGGGAAGCTCT 105474 |||| | |||||||| |||| || | | ||||| ||| || ||||| || | Sbjct 18065 TTCAGTATGATATGT-GGAATGTTACTC----CTTCAGATCTATGGGATTGGGATGCATT 18119 Query 105475 CAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAAC 105534 || | || | | ||| |||| ||| |||||| | || || ||||| || Sbjct 18120 GAAAGCTGAGATTGCTAAACATGGTGTTCGCAACTCTCTCCTTGTTGCCCCTATGCCTAC 18179 Query 105535 AGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACAT 105594 || |||||| | ||||||||||| || || |||||||| || || |||||| | ||||| Sbjct 18180 TGCATCCACCTCTCAAATCTTGGGCAACAACGAATGCTTCGAGCCATACACGTCCAACAT 18239 Query 105595 CTA 105597 ||| Sbjct 18240 CTA 18242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583250046129000